fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G69580.1 VDDDEHLKLSLNTYKK at 312/336 in AT1G69580.1
VDDDEHLKLSLNTYKK at 313/337 in AT1G69580.2
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt035574 not found in 338aa AT1G69580.1 1st_1st 0.402261712 Ia
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G69580.1     MCLLMEINNNANNTNTTIDNHKAKMSLVLSTDAKPRLKWTCDLHHKFIEAVNQLGGPNKA
pt035574_POPTR_ MGL----------------RHQ-NMNLVLSTDGKPRLKWTQELHQRFVEAVNQLGGADRA
                * *                .*: :*.******.******* :**::*:********.::*

AT1G69580.1     TPKGLMKVMEIPGLTLYHLKSHLQ-----------KYRLGKSMK---FDDNKLEVSSASE
pt035574_POPTR_ TPKSLMRVMEIPGLTLYHLKSHLQAILFRMIRSIYKYRLGKSQQSLISIENNQEVLFVAD
                ***.**:*****************           ******* :     :*: **  .::

AT1G69580.1     NQEVESKNDSR------DLRGCSVTEENSNPAKEGLQITEALQMQMEVQKKLHEQIEVQR
pt035574_POPTR_ AKEIQSSDDHFQESAFIQSSGGICSDGNQHPINGSFQIAQALQMQMEVKRKLHEQIEVQR
                 :*::*.:*        :  *   :: *.:* : .:**::********::**********

AT1G69580.1     HLQVKIEAQGKYLQSVLMKAQQTLAGYSSSNLGMDFARTELSRLASMVNRGCPSTSFSEL
pt035574_POPTR_ HLQLRIEAQGKYLQSVLKKAQETLAGYNSYSMGVELAKAELSRLVSMANSGCPSSSISDL
                ***::************ ***:*****.* .:*:::*::*****.**.* ****:*:*:*

AT1G69580.1     TQVEEEEEGFLWYKKPENRGISQLR-----------CSVESSLTSSETSETK--------
pt035574_POPTR_ TET----------------GGSSLRDMERTQTRSAVCSMESSLTSSESSGRKEDMQQKNE
                *:.                * *.**           **:********:*  *        

AT1G69580.1     -LDTDNNLNKSIELPLMEINSE--------VMKGKKRS---INDVVCVEQPLMKRAFGVD
pt035574_POPTR_ IHDTEKSNTASVELSLMDIHPQDNPLNTCSSNQGKKRSGRIISDGVSVEQPLASRLKNGD
                  **::. . *:**.**:*:.:          :*****   *.* *.***** .*  . *

AT1G69580.1     DDEHLKLSLNTYKKDMEACTNIGLGFN
pt035574_POPTR_ -----QLSLGMF--DLNS---------
                     :***. :  *:::
BoxShade v3.31 C (beta, 970507) Output
AT1G69580.1     M C L L M E I N N N A N N T N T T I D N H K A K M S L V L S T D A K P R L K W T C D L H H K F I E A V N Q L G G P N K A
pt035574_POPTR_    M G L - - - - - - - - - - - - - - - - R H Q - N M N L V L S T D G K P R L K W T Q E L H Q R F V E A V N Q L G G A D R A
 
AT1G69580.1     T P K G L M K V M E I P G L T L Y H L K S H L Q - - - - - - - - - - - K Y R L G K S M K - - - F D D N K L E V S S A S E
pt035574_POPTR_    T P K S L M R V M E I P G L T L Y H L K S H L Q A I L F R M I R S I Y K Y R L G K S Q Q S L I S I E N N Q E V L F V A D
 
AT1G69580.1     N Q E V E S K N D S R - - - - - - D L R G C S V T E E N S N P A K E G L Q I T E A L Q M Q M E V Q K K L H E Q I E V Q R
pt035574_POPTR_    A K E I Q S S D D H F Q E S A F I Q S S G G I C S D G N Q H P I N G S F Q I A Q A L Q M Q M E V K R K L H E Q I E V Q R
 
AT1G69580.1     H L Q V K I E A Q G K Y L Q S V L M K A Q Q T L A G Y S S S N L G M D F A R T E L S R L A S M V N R G C P S T S F S E L
pt035574_POPTR_    H L Q L R I E A Q G K Y L Q S V L K K A Q E T L A G Y N S Y S M G V E L A K A E L S R L V S M A N S G C P S S S I S D L
 
AT1G69580.1     T Q V E E E E E G F L W Y K K P E N R G I S Q L R - - - - - - - - - - - C S V E S S L T S S E T S E T K - - - - - - - -
pt035574_POPTR_    T E T - - - - - - - - - - - - - - - - G G S S L R D M E R T Q T R S A V C S M E S S L T S S E S S G R K E D M Q Q K N E
 
AT1G69580.1     - L D T D N N L N K S I E L P L M E I N S E - - - - - - - - V M K G K K R S - - - I N D V V C V E Q P L M K R A F G V D
pt035574_POPTR_    I H D T E K S N T A S V E L S L M D I H P Q D N P L N T C S S N Q G K K R S G R I I S D G V S V E Q P L A S R L K N G D
 
AT1G69580.1     D D E H L K L S L N T Y K K D M E A C T N I G L G F N
pt035574_POPTR_    - - - - - Q L S L G M F - - D L N S - - - - - - - - -
 
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