fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G69600.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm050382 not found in 308aa AT3G28920.1 1st_not 0.408450704 II
Pt020175 not found in 334aa AT3G28920.1 1st_not 0.401408450 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT1G69600.1     MDLSS------------KPQQQLLN-SLPIAGEL--------------TVTGEMG-----
pt020175_POPTR_ MDITPATATATATGTATTPTNNNTNTTIPKSPEADTGTPTRI------PQTKPLSFTNGV
gm050382_Glyma1 MDITP---TTTIINTTTTP-------SAAKSPEHETETPTRITTPITPTTTKTLSFSNGV
                **::.            .*       : . : *               . *  :.     

AT1G69600.1     ---------------------VCYKECLKNHAANLGGHALDGCGEFMPSPTATSTDPSSL
pt020175_POPTR_ LKRHHPHHHHLHNHFAPPPVVITYKECLKNHAATIGGHALDGCGEFMPSPTATHTDPTSL
gm050382_Glyma1 LKRH--HHHHLHH---PMPAVVTYKECLKNHAANLGGLALDGCGEFMPSPTATAADPSSI
                                     : **********.:** *************** :**:*:

AT1G69600.1     RCAACGCHRNFHRRDPSENLNFLTA---------------PPISSPSGTESPPSRHVSSP
pt020175_POPTR_ KCAACGCHRNFHRREPEDSPPHTTAITTIEYQPHHRHHPPPPQAHPQHNRSPNS---ASP
gm050382_Glyma1 KCAACGCHRNFHRREPEDPPITSNTTHVIEYQPHHRHHPPPPLHAAAAARSPNS---ASP
                :*************:*.:     .:               **   .   .** *   :**

AT1G69600.1     VP--CSYYTSAPPHHVILSLSSGFPGPSD-----QDPTVVRSENSSRGAM-RKRTRTKFT
pt020175_POPTR_ PPISSSYYPSAP--HMLLALSGGVSGLNENVNINAPP---RAGSSP-----RKRFRTKFS
gm050382_Glyma1 PPISSSYYPSAP--HMLLALSAGLA---------APP---ESTAAPSAALSRKRFRTKFS
                 *  .***.***  *::*:**.*..           *   .:  :.     *** ****:

AT1G69600.1     PEQKIKMRAFAEKAGWKINGCDEKSVREFCNEVGIERGVLKVWMHNNKYSL-----LNGK
pt020175_POPTR_ QSQKERMHQFAEKVGWKMQKRDEDLVQEFCNEVGVDRSALKVWMHNNKNSFGKKEHLNGN
gm050382_Glyma1 QEQKEKMHKFAEKVGWKIQKRDEDLIHEFCNEVGVDRSVLKVWMHNNKNTFAKK------
                 .** :*: ****.***::  **. ::*******::*..********* ::         

AT1G69600.1     -IREIEHGLCLNTHSND----------------------------GDGSSSS-
pt020175_POPTR_ NDDNIRSSNLENSYSNNESNKDITNNNNNNNHHHFENDSHAAHVGTNGSSSSS
gm050382_Glyma1 -DNNIVFENPNNNHGSGSGGGEDPAEDPSRNHY------GGVNVGANGSSSSS
                   :*      *.:...                             :*****
BoxShade v3.31 C (beta, 970507) Output
AT1G69600.1     M D L S S - - - - - - - - - - - - K P Q Q Q L L N - S L P I A G E L - - - - - - - - - - - - - - T V T G E M G - - - - -
pt020175_POPTR_    M D I T P A T A T A T A T G T A T T P T N N N T N T T I P K S P E A D T G T P T R I - - - - - - P Q T K P L S F T N G V
gm050382_Glyma1    M D I T P - - - T T T I I N T T T T P - - - - - - - S A A K S P E H E T E T P T R I T T P I T P T T T K T L S F S N G V
 
AT1G69600.1     - - - - - - - - - - - - - - - - - - - - - V C Y K E C L K N H A A N L G G H A L D G C G E F M P S P T A T S T D P S S L
pt020175_POPTR_    L K R H H P H H H H L H N H F A P P P V V I T Y K E C L K N H A A T I G G H A L D G C G E F M P S P T A T H T D P T S L
gm050382_Glyma1    L K R H - - H H H H L H H - - - P M P A V V T Y K E C L K N H A A N L G G L A L D G C G E F M P S P T A T A A D P S S I
 
AT1G69600.1     R C A A C G C H R N F H R R D P S E N L N F L T A - - - - - - - - - - - - - - - P P I S S P S G T E S P P S R H V S S P
pt020175_POPTR_    K C A A C G C H R N F H R R E P E D S P P H T T A I T T I E Y Q P H H R H H P P P P Q A H P Q H N R S P N S - - - A S P
gm050382_Glyma1    K C A A C G C H R N F H R R E P E D P P I T S N T T H V I E Y Q P H H R H H P P P P L H A A A A A R S P N S - - - A S P
 
AT1G69600.1     V P - - C S Y Y T S A P P H H V I L S L S S G F P G P S D - - - - - Q D P T V V R S E N S S R G A M - R K R T R T K F T
pt020175_POPTR_    P P I S S S Y Y P S A P - - H M L L A L S G G V S G L N E N V N I N A P P - - - R A G S S P - - - - - R K R F R T K F S
gm050382_Glyma1    P P I S S S Y Y P S A P - - H M L L A L S A G L A - - - - - - - - - A P P - - - E S T A A P S A A L S R K R F R T K F S
 
AT1G69600.1     P E Q K I K M R A F A E K A G W K I N G C D E K S V R E F C N E V G I E R G V L K V W M H N N K Y S L - - - - - L N G K
pt020175_POPTR_    Q S Q K E R M H Q F A E K V G W K M Q K R D E D L V Q E F C N E V G V D R S A L K V W M H N N K N S F G K K E H L N G N
gm050382_Glyma1    Q E Q K E K M H K F A E K V G W K I Q K R D E D L I H E F C N E V G V D R S V L K V W M H N N K N T F A K K - - - - - -
 
AT1G69600.1     - I R E I E H G L C L N T H S N D - - - - - - - - - - - - - - - - - - - - - - - - - - - - G D G S S S S -
pt020175_POPTR_    N D D N I R S S N L E N S Y S N N E S N K D I T N N N N N N N H H H F E N D S H A A H V G T N G S S S S S
gm050382_Glyma1    - D N N I V F E N P N N N H G S G S G G G E D P A E D P S R N H Y - - - - - - G G V N V G A N G S S S S S
 
0