fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G69600.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt020175 not found in 334aa AT3G28920.1 1st_not 0.401408450 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G69600.1     MDLS------------SKPQQQLLNS---------------LPIAGELTVTG--------
pt020175_POPTR_ MDITPATATATATGTATTPTNNNTNTTIPKSPEADTGTPTRIPQTKPLSFTNGVLKRHHP
                **::            :.* ::  *:               :* :  *:.*.        

AT1G69600.1     ------------EMGVCYKECLKNHAANLGGHALDGCGEFMPSPTATSTDPSSLRCAACG
pt020175_POPTR_ HHHHLHNHFAPPPVVITYKECLKNHAATIGGHALDGCGEFMPSPTATHTDPTSLKCAACG
                             : : **********.:****************** ***:**:*****

AT1G69600.1     CHRNFHRRDPSENLNFLTA---------------PPISSPSGTESPPSRHVSSPVP--CS
pt020175_POPTR_ CHRNFHRREPEDSPPHTTAITTIEYQPHHRHHPPPPQAHPQHNRSPNS---ASPPPISSS
                ********:*.:.  . **               ** : *. ..** *   :** *  .*

AT1G69600.1     YYTSAPPHHVILSLSSGFPGPSDQDPTVVRSENSSRGAMRKRTRTKFTPEQKIKMRAFAE
pt020175_POPTR_ YYPSAP--HMLLALSGGVSGLNEN--VNINAPPRAGSSPRKRFRTKFSQSQKERMHQFAE
                **.***  *::*:**.*..* .::  . :.:   : .: *** ****: .** :*: ***

AT1G69600.1     KAGWKINGCDEKSVREFCNEVGIERGVLKVWMHNNKYSL-----LNG----KIR------
pt020175_POPTR_ KVGWKMQKRDEDLVQEFCNEVGVDRSALKVWMHNNKNSFGKKEHLNGNNDDNIRSSNLEN
                *.***::  **. *:*******::*..********* *:     ***    :**      

AT1G69600.1     ---------EIEHGLCLNTH---SNDG-------DGSSSS-
pt020175_POPTR_ SYSNNESNKDITNNNNNNNHHHFENDSHAAHVGTNGSSSSS
                         :* :.   *.*   .**.       :*****
BoxShade v3.31 C (beta, 970507) Output
AT1G69600.1     M D L S - - - - - - - - - - - - S K P Q Q Q L L N S - - - - - - - - - - - - - - - L P I A G E L T V T G - - - - - - - -
pt020175_POPTR_    M D I T P A T A T A T A T G T A T T P T N N N T N T T I P K S P E A D T G T P T R I P Q T K P L S F T N G V L K R H H P
 
AT1G69600.1     - - - - - - - - - - - - E M G V C Y K E C L K N H A A N L G G H A L D G C G E F M P S P T A T S T D P S S L R C A A C G
pt020175_POPTR_    H H H H L H N H F A P P P V V I T Y K E C L K N H A A T I G G H A L D G C G E F M P S P T A T H T D P T S L K C A A C G
 
AT1G69600.1     C H R N F H R R D P S E N L N F L T A - - - - - - - - - - - - - - - P P I S S P S G T E S P P S R H V S S P V P - - C S
pt020175_POPTR_    C H R N F H R R E P E D S P P H T T A I T T I E Y Q P H H R H H P P P P Q A H P Q H N R S P N S - - - A S P P P I S S S
 
AT1G69600.1     Y Y T S A P P H H V I L S L S S G F P G P S D Q D P T V V R S E N S S R G A M R K R T R T K F T P E Q K I K M R A F A E
pt020175_POPTR_    Y Y P S A P - - H M L L A L S G G V S G L N E N - - V N I N A P P R A G S S P R K R F R T K F S Q S Q K E R M H Q F A E
 
AT1G69600.1     K A G W K I N G C D E K S V R E F C N E V G I E R G V L K V W M H N N K Y S L - - - - - L N G - - - - K I R - - - - - -
pt020175_POPTR_    K V G W K M Q K R D E D L V Q E F C N E V G V D R S A L K V W M H N N K N S F G K K E H L N G N N D D N I R S S N L E N
 
AT1G69600.1     - - - - - - - - - E I E H G L C L N T H - - - S N D G - - - - - - - D G S S S S -
pt020175_POPTR_    S Y S N N E S N K D I T N N N N N N N H H H F E N D S H A A H V G T N G S S S S S
 
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