fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G69600.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm050382 not found in 308aa AT3G28920.1 1st_not 0.408450704 II
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G69600.1     MDLSSKPQQQLLN---------------------SLPIAGELTVTGEMG-----------
gm050382_Glyma1 MDIT--PTTTIINTTTTPSAAKSPEHETETPTRITTPITPTTTKTLSFSNGVLKRHHHHH
                **::  *   ::*                     : **:   * * .:.           

AT1G69600.1     --------VCYKECLKNHAANLGGHALDGCGEFMPSPTATSTDPSSLRCAACGCHRNFHR
gm050382_Glyma1 LHHPMPAVVTYKECLKNHAANLGGLALDGCGEFMPSPTATAADPSSIKCAACGCHRNFHR
                        * ************** ***************::****::************

AT1G69600.1     RDPSENLNFLTAPPISS---------PSGTESPP----------SRHVSSPVP--CSYYT
gm050382_Glyma1 REPED-------PPITSNTTHVIEYQPHHRHHPPPPLHAAAAARSPNSASPPPISSSYYP
                *:*.:       ***:*         *   . **          * : :** *  .***.

AT1G69600.1     SAPPHHVILSLSSGFPGP--SDQDPTVVRSENSSRGAMRKRTRTKFTPEQKIKMRAFAEK
gm050382_Glyma1 SAP--HMLLALSAGLAAPPESTAAPSAALS--------RKRFRTKFSQEQKEKMHKFAEK
                ***  *::*:**:*:..*  *   *:.. *        *** ****: *** **: ****

AT1G69600.1     AGWKINGCDEKSVREFCNEVGIERGVLKVWMHNNKYSLL---NGKIREIEHGLCLNTHSN
gm050382_Glyma1 VGWKIQKRDEDLIHEFCNEVGVDRSVLKVWMHNNKNTFAKKDNNIVFE-------NPNNN
                .****:  **. ::*******::*.********** ::    *. : *       *.:.*

AT1G69600.1     DG-------------------------DGSSSS-
gm050382_Glyma1 HGSGSGGGEDPAEDPSRNHYGGVNVGANGSSSSS
                .*                         :*****
BoxShade v3.31 C (beta, 970507) Output
AT1G69600.1     M D L S S K P Q Q Q L L N - - - - - - - - - - - - - - - - - - - - - S L P I A G E L T V T G E M G - - - - - - - - - - -
gm050382_Glyma1    M D I T - - P T T T I I N T T T T P S A A K S P E H E T E T P T R I T T P I T P T T T K T L S F S N G V L K R H H H H H
 
AT1G69600.1     - - - - - - - - V C Y K E C L K N H A A N L G G H A L D G C G E F M P S P T A T S T D P S S L R C A A C G C H R N F H R
gm050382_Glyma1    L H H P M P A V V T Y K E C L K N H A A N L G G L A L D G C G E F M P S P T A T A A D P S S I K C A A C G C H R N F H R
 
AT1G69600.1     R D P S E N L N F L T A P P I S S - - - - - - - - - P S G T E S P P - - - - - - - - - - S R H V S S P V P - - C S Y Y T
gm050382_Glyma1    R E P E D - - - - - - - P P I T S N T T H V I E Y Q P H H R H H P P P P L H A A A A A R S P N S A S P P P I S S S Y Y P
 
AT1G69600.1     S A P P H H V I L S L S S G F P G P - - S D Q D P T V V R S E N S S R G A M R K R T R T K F T P E Q K I K M R A F A E K
gm050382_Glyma1    S A P - - H M L L A L S A G L A A P P E S T A A P S A A L S - - - - - - - - R K R F R T K F S Q E Q K E K M H K F A E K
 
AT1G69600.1     A G W K I N G C D E K S V R E F C N E V G I E R G V L K V W M H N N K Y S L L - - - N G K I R E I E H G L C L N T H S N
gm050382_Glyma1    V G W K I Q K R D E D L I H E F C N E V G V D R S V L K V W M H N N K N T F A K K D N N I V F E - - - - - - - N P N N N
 
AT1G69600.1     D G - - - - - - - - - - - - - - - - - - - - - - - - - D G S S S S -
gm050382_Glyma1    H G S G S G G G E D P A E D P S R N H Y G G V N V G A N G S S S S S
 
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