fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G70000.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pp009452 PERGVRLFGVRLTDG in 24/425 AT5G47390.1 1st_not 0.423167848 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G70000.1     MSRSCSQCGNNGHNSRTCPTDITTTGDNNDKGGGEKAIMLFGVRVTEA-SSSCFRKSVSM
pp009452_Pp1s89 MSRRCSHCGLNGHNSRTCP---------------ERGVRLFGVRLTDGVSSTNMRKSVSM
                *** **:** *********               *:.: *****:*:. **: :******

AT1G70000.1     NNLSQFDQTPDP-NPTDD-------GGYASDDVVHASGRNRERKRGTPWTEEEHRLFLTG
pp009452_Pp1s89 NNLSHYSNVHNPASPPEQWESGAAPDGYVSDGLVQTSNNARERKKGVPWTEDEHRLFLLG
                ****::.:. :* .*.::       .**.**.:*::*.. ****:*.****:****** *

AT1G70000.1     LHKVGKGDWRGISRNFVKTRTPTQVASHAQKYFLRRTNQNRRRRRSSLFDITPDSFIGSS
pp009452_Pp1s89 LQKLGKGDWRGISKNFVQTRTPTQVASHAQKYFIRQSNMNKRKRRSSLFDMVSEIGIPSI
                *:*:*********:***:***************:*::* *:*:*******:..:  * * 

AT1G70000.1     KEEN------QLQTPLEL---------------------------IRP--------VPIP
pp009452_Pp1s89 AEESTSIADEEHATPLPQLSLGHSSLYTAAGVLYEASSMQGYRLPVRPHSVPKHASLPMA
                 **.      :  ***                             :**        :*:.

AT1G70000.1     IPI----------------------------------------PPSRKMADLNLNKKKTP
pp009452_Pp1s89 LPLMAVGSSRGGRGAAGAEGMTTEVVGMMGFDAKSSSRSGLERPVARGMSS-SYNMESSS
                :*:                                        * :* *:. . * :.:.

AT1G70000.1     ATTEM------------------------------FPLSL-------------------N
pp009452_Pp1s89 SRSAMDRGGPAVPVAVASCAGDPGVRVGGASGAGSIPFSFSWWAGLGQGRPMGPSPPQCN
                : : *                              :*:*:                   *

AT1G70000.1     LQRPSSSTSSSSN--------EQKARG--------------------------SRASSGF
pp009452_Pp1s89 IVRPTAKVAAVSSAPAKMEEEEEKEDGRDIAELSLGPSRAEPSQLTAKLLEAPSRHSSAF
                : **::..:: *.        *:*  *                          ** **.*

AT1G70000.1     EAMSS-NGDSI-MGVA-----
pp009452_Pp1s89 HVSSSFDANSIQQGVNAISVV
                .. ** :.:**  **
BoxShade v3.31 C (beta, 970507) Output
AT1G70000.1     M S R S C S Q C G N N G H N S R T C P T D I T T T G D N N D K G G G E K A I M L F G V R V T E A - S S S C F R K S V S M
pp009452_Pp1s89    M S R R C S H C G L N G H N S R T C P - - - - - - - - - - - - - - - E R G V R L F G V R L T D G V S S T N M R K S V S M
 
AT1G70000.1     N N L S Q F D Q T P D P - N P T D D - - - - - - - G G Y A S D D V V H A S G R N R E R K R G T P W T E E E H R L F L T G
pp009452_Pp1s89    N N L S H Y S N V H N P A S P P E Q W E S G A A P D G Y V S D G L V Q T S N N A R E R K K G V P W T E D E H R L F L L G
 
AT1G70000.1     L H K V G K G D W R G I S R N F V K T R T P T Q V A S H A Q K Y F L R R T N Q N R R R R R S S L F D I T P D S F I G S S
pp009452_Pp1s89    L Q K L G K G D W R G I S K N F V Q T R T P T Q V A S H A Q K Y F I R Q S N M N K R K R R S S L F D M V S E I G I P S I
 
AT1G70000.1     K E E N - - - - - - Q L Q T P L E L - - - - - - - - - - - - - - - - - - - - - - - - - - - I R P - - - - - - - - V P I P
pp009452_Pp1s89    A E E S T S I A D E E H A T P L P Q L S L G H S S L Y T A A G V L Y E A S S M Q G Y R L P V R P H S V P K H A S L P M A
 
AT1G70000.1     I P I - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - P P S R K M A D L N L N K K K T P
pp009452_Pp1s89    L P L M A V G S S R G G R G A A G A E G M T T E V V G M M G F D A K S S S R S G L E R P V A R G M S S - S Y N M E S S S
 
AT1G70000.1     A T T E M - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - F P L S L - - - - - - - - - - - - - - - - - - - N
pp009452_Pp1s89    S R S A M D R G G P A V P V A V A S C A G D P G V R V G G A S G A G S I P F S F S W W A G L G Q G R P M G P S P P Q C N
 
AT1G70000.1     L Q R P S S S T S S S S N - - - - - - - - E Q K A R G - - - - - - - - - - - - - - - - - - - - - - - - - - S R A S S G F
pp009452_Pp1s89    I V R P T A K V A A V S S A P A K M E E E E E K E D G R D I A E L S L G P S R A E P S Q L T A K L L E A P S R H S S A F
 
AT1G70000.1     E A M S S - N G D S I - M G V A - - - - -
pp009452_Pp1s89    H V S S S F D A N S I Q Q G V N A I S V V
 
0