fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G70000.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt034355 KDQLTALSLKLSTPSS in 270/307 AT1G70000.1 not_1st 0.508274231 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G70000.1     -MSRSCSQCGNNGHNSRTCPTDITTTGDNNDKGGGEKAIMLFGVRVTEASSSCFRKSVSM
pt034355_POPTR_ MMSRSCSQCGNNGHNSRTC-GESPCCGDQNVTPTG---IMLFGVRLAEGAAS-FRKSASM
                 ******************  : .  **:* .  *   *******::*.::* ****.**

AT1G70000.1     NNLSQFDQTPDPNPTDD--GGYASDDVVHASGRNRERKRGTPWTEEEHRLFLTGLHKVGK
pt034355_POPTR_ INLSQYEQ-PHEEPNADVAAGYESDDVVHASGRSRERKRGVPWTEEEHKLFLLGLQKVGK
                 ****::* *. :*. *  .** **********.******.*******:*** **:****

AT1G70000.1     GDWRGISRNFVKTRTPTQVASHAQKYFLRRTNQNRRRRRSSLFDITPDSFI---GSSKEE
pt034355_POPTR_ GDWRGISRNFVKTRTPTQVASHAQKYFLRRNNQNRRRRRSSLFDITTDTFMISGGSSMEE
                ******************************.***************.*:*:   *** **

AT1G70000.1     NQLQ-----------------------------------------TPLE-----------
pt034355_POPTR_ DQVHQETPALALPQPQPRLNNNRPEGLPMATFPVISPVTSPLSGDNPMEKLTLGQTNVDK
                :*::                                         .*:*           

AT1G70000.1     ----LIRPVPIPIPIPPSRKMADLNLNKKKTPATTEMFPLSLNLQRPSSSTSSSSNEQKA
pt034355_POPTR_ MSPKLFRPTPI-IPIPPSSKLADINLNQKG--PKDQLTALSLKLSTPSSE------EQST
                    *:**.** ****** *:**:***:*   .. :: .***:*. ***.      **.:

AT1G70000.1     RGSRASSGFEAMSSNGDSIMGVA
pt034355_POPTR_ PASTHSSVFQAISSS-DSIISVA
                 .*  ** *:*:**. ***:.**
BoxShade v3.31 C (beta, 970507) Output
AT1G70000.1     - M S R S C S Q C G N N G H N S R T C P T D I T T T G D N N D K G G G E K A I M L F G V R V T E A S S S C F R K S V S M
pt034355_POPTR_    M M S R S C S Q C G N N G H N S R T C - G E S P C C G D Q N V T P T G - - - I M L F G V R L A E G A A S - F R K S A S M
 
AT1G70000.1     N N L S Q F D Q T P D P N P T D D - - G G Y A S D D V V H A S G R N R E R K R G T P W T E E E H R L F L T G L H K V G K
pt034355_POPTR_    I N L S Q Y E Q - P H E E P N A D V A A G Y E S D D V V H A S G R S R E R K R G V P W T E E E H K L F L L G L Q K V G K
 
AT1G70000.1     G D W R G I S R N F V K T R T P T Q V A S H A Q K Y F L R R T N Q N R R R R R S S L F D I T P D S F I - - - G S S K E E
pt034355_POPTR_    G D W R G I S R N F V K T R T P T Q V A S H A Q K Y F L R R N N Q N R R R R R S S L F D I T T D T F M I S G G S S M E E
 
AT1G70000.1     N Q L Q - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - T P L E - - - - - - - - - - -
pt034355_POPTR_    D Q V H Q E T P A L A L P Q P Q P R L N N N R P E G L P M A T F P V I S P V T S P L S G D N P M E K L T L G Q T N V D K
 
AT1G70000.1     - - - - L I R P V P I P I P I P P S R K M A D L N L N K K K T P A T T E M F P L S L N L Q R P S S S T S S S S N E Q K A
pt034355_POPTR_    M S P K L F R P T P I - I P I P P S S K L A D I N L N Q K G - - P K D Q L T A L S L K L S T P S S E - - - - - - E Q S T
 
AT1G70000.1     R G S R A S S G F E A M S S N G D S I M G V A
pt034355_POPTR_    P A S T H S S V F Q A I S S S - D S I I S V A
 
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