fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G70000.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm002840 not found in 300aa AT1G70000.1 not_1st 0.541371158 II
Gm022860 DLSGKSLSLKLPVSKP in 178/206 AT1G70000.1 not_1st 0.416075650 II
Get sequence file
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT1G70000.1     MSRSCSQCGNNGHNSRTCPTD---ITTTGDNNDKGGGEKAIMLFGVRVTEASS--SCFRK
gm022860_Glyma0 ------MC----------------------SAEKDG----IMLFGVRLSVVDNHPTSFRK
gm002840_Glyma0 MSRTCSLCGNNGHNSRTC-TDGGAAASCGGSPRENG----IMLFGVRVMTEAN--SSFRK
                       *                      .  :.*    *******:    .  :.***

AT1G70000.1     SVSMNNLSQFDQTPDPNPTDDGGYASDDVVHASGRNRERKRGTPWTEEEHRLFLTGLHKV
gm022860_Glyma0 SASMTNLSQYESPPPHDP--NAGYASDDVVHPSRHTRERKRGVPWTEEEHRLFLLGLQNI
gm002840_Glyma0 SASMNNLSQYDA-ESNAA--DAGYASDDVVHASGRTRERKRGVPWTEEEHRLFLLGLHKV
                *.**.****::      .  :.*********.* :.******.*********** **:::

AT1G70000.1     GKGDWRGISRNFVKTRTPTQVASHAQKYFLRRTNQNRRRRRSSLFDITPDSFIGSS--KE
gm022860_Glyma0 GKGDWRGISRNFVKTRTPTQVASHAQKYFLRRHTQNRRRRRSSLFDITTDSVMEPWPEKE
gm002840_Glyma0 GKGDWRGISRNFVKTRTPTQVASHAQKYFLRRHNQNRRRRRSSLFDITTDTVMESSTIME
                ******************************** .**************.*:.: .    *

AT1G70000.1     ENQ----------------------------LQTPLE------LIRPVPIPIPIPPSRKM
gm022860_Glyma0 EEQ----------------------------VVLPSA--------RSKPV-LPVPPSSKM
gm002840_Glyma0 EEQVPQETMAAPIPAAYPPFPGAGFPMSLSPVVLPVSGERLTKPIRPTPI-VPVPPSSKM
                *:*                            :  *          *. *: :*:*** **

AT1G70000.1     ADLNLNKKKTPAT-TEMFPLSLNLQRPSSSTSSSSNEQKARGSRASS---GFEAMSSN--
gm022860_Glyma0 AELDLSGKS----------LSLKLPVSKP------------------------PISNENF
gm002840_Glyma0 ANLNLKGKASRTNLIEPLPLSLNLPSPTPRSQDQSPANSGHSSPSSSSAAAFQAMSAAKF
                *:*:*. *           ***:*  ...                        .:*    

AT1G70000.1     ---GDSIMGVA
gm022860_Glyma0 GGIPLSVLLEG
gm002840_Glyma0 GGGGDSIISVA
                     *::  .
BoxShade v3.31 C (beta, 970507) Output
AT1G70000.1     M S R S C S Q C G N N G H N S R T C P T D - - - I T T T G D N N D K G G G E K A I M L F G V R V T E A S S - - S C F R K
gm022860_Glyma0    - - - - - - M C - - - - - - - - - - - - - - - - - - - - - - S A E K D G - - - - I M L F G V R L S V V D N H P T S F R K
gm002840_Glyma0    M S R T C S L C G N N G H N S R T C - T D G G A A A S C G G S P R E N G - - - - I M L F G V R V M T E A N - - S S F R K
 
AT1G70000.1     S V S M N N L S Q F D Q T P D P N P T D D G G Y A S D D V V H A S G R N R E R K R G T P W T E E E H R L F L T G L H K V
gm022860_Glyma0    S A S M T N L S Q Y E S P P P H D P - - N A G Y A S D D V V H P S R H T R E R K R G V P W T E E E H R L F L L G L Q N I
gm002840_Glyma0    S A S M N N L S Q Y D A - E S N A A - - D A G Y A S D D V V H A S G R T R E R K R G V P W T E E E H R L F L L G L H K V
 
AT1G70000.1     G K G D W R G I S R N F V K T R T P T Q V A S H A Q K Y F L R R T N Q N R R R R R S S L F D I T P D S F I G S S - - K E
gm022860_Glyma0    G K G D W R G I S R N F V K T R T P T Q V A S H A Q K Y F L R R H T Q N R R R R R S S L F D I T T D S V M E P W P E K E
gm002840_Glyma0    G K G D W R G I S R N F V K T R T P T Q V A S H A Q K Y F L R R H N Q N R R R R R S S L F D I T T D T V M E S S T I M E
 
AT1G70000.1     E N Q - - - - - - - - - - - - - - - - - - - - - - - - - - - - L Q T P L E - - - - - - L I R P V P I P I P I P P S R K M
gm022860_Glyma0    E E Q - - - - - - - - - - - - - - - - - - - - - - - - - - - - V V L P S A - - - - - - - - R S K P V - L P V P P S S K M
gm002840_Glyma0    E E Q V P Q E T M A A P I P A A Y P P F P G A G F P M S L S P V V L P V S G E R L T K P I R P T P I - V P V P P S S K M
 
AT1G70000.1     A D L N L N K K K T P A T - T E M F P L S L N L Q R P S S S T S S S S N E Q K A R G S R A S S - - - G F E A M S S N - -
gm022860_Glyma0    A E L D L S G K S - - - - - - - - - - L S L K L P V S K P - - - - - - - - - - - - - - - - - - - - - - - - P I S N E N F
gm002840_Glyma0    A N L N L K G K A S R T N L I E P L P L S L N L P S P T P R S Q D Q S P A N S G H S S P S S S S A A A F Q A M S A A K F
 
AT1G70000.1     - - - G D S I M G V A
gm022860_Glyma0    G G I P L S V L L E G
gm002840_Glyma0    G G G G D S I I S V A
 
0