fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G70000.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm000561 not found in 300aa AT1G70000.1 1st_1st 0.557919621 Ia
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Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G70000.1     MSRSCSQCGNNGHNSRTCPTDITTTGDNNDKGGGEKAIMLFGVRVTEASSSCFRKSVSMN
gm000561_Glyma0 MSRTCSQCGNNGHNSRTC-TDGGAAGSPRENG-----IMLFGVRVMTEANSSFRKSASMN
                ***:************** **  ::*. .::*     ********   :.*.****.***

AT1G70000.1     NLSQFDQTPDPNPTDDGGYASDDVVHASGRNRERKRGTPWTEEEHRLFLTGLHKVGKGDW
gm000561_Glyma0 NLSQYDAEFN---AADAGYASDDVVHASGRTRERKRGVPWTEEEHRLFLLGLHKVGKGDW
                ****:*   :   : *.*************.******.*********** **********

AT1G70000.1     RGISRNFVKTRTPTQVASHAQKYFLRRTNQNRRRRRSSLFDITPDSFIGSSKEENQLQTP
gm000561_Glyma0 RGISRNFVKTRTPTQVASHAQKYFLRRHNQNRRRRRSSLFDITTDTVMESSTIMEEEQVP
                *************************** ***************.*:.: **.  :: *.*

AT1G70000.1     LEL---------------------------------------IRPVPIPIPIPPSRKMAD
gm000561_Glyma0 PETVAAPLPAAYPPSHYGAFAGAGFPIAPVVLPVSGERLTKPIRPTPI-LPVPPSSKMAN
                 *                                        ***.** :*:*** ***:

AT1G70000.1     LNLNKKKTPAT-TEMFPLSLNLQRPS----SSTSSSSNEQKARGSRASSGFEAMS-----
gm000561_Glyma0 LNLKEKASPTNLIEPLPLSLNLPSPTPRSQDQSSASSGHSSPSSSSSAAAFQAMSAAKFG
                ***::* :*:.  * :******  *:    ..:*:**..... .* :::.*:***     

AT1G70000.1     SNGDSIMGVA
gm000561_Glyma0 SGGDSIISVA
                *.****:.**
BoxShade v3.31 C (beta, 970507) Output
AT1G70000.1     M S R S C S Q C G N N G H N S R T C P T D I T T T G D N N D K G G G E K A I M L F G V R V T E A S S S C F R K S V S M N
gm000561_Glyma0    M S R T C S Q C G N N G H N S R T C - T D G G A A G S P R E N G - - - - - I M L F G V R V M T E A N S S F R K S A S M N
 
AT1G70000.1     N L S Q F D Q T P D P N P T D D G G Y A S D D V V H A S G R N R E R K R G T P W T E E E H R L F L T G L H K V G K G D W
gm000561_Glyma0    N L S Q Y D A E F N - - - A A D A G Y A S D D V V H A S G R T R E R K R G V P W T E E E H R L F L L G L H K V G K G D W
 
AT1G70000.1     R G I S R N F V K T R T P T Q V A S H A Q K Y F L R R T N Q N R R R R R S S L F D I T P D S F I G S S K E E N Q L Q T P
gm000561_Glyma0    R G I S R N F V K T R T P T Q V A S H A Q K Y F L R R H N Q N R R R R R S S L F D I T T D T V M E S S T I M E E E Q V P
 
AT1G70000.1     L E L - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - I R P V P I P I P I P P S R K M A D
gm000561_Glyma0    P E T V A A P L P A A Y P P S H Y G A F A G A G F P I A P V V L P V S G E R L T K P I R P T P I - L P V P P S S K M A N
 
AT1G70000.1     L N L N K K K T P A T - T E M F P L S L N L Q R P S - - - - S S T S S S S N E Q K A R G S R A S S G F E A M S - - - - -
gm000561_Glyma0    L N L K E K A S P T N L I E P L P L S L N L P S P T P R S Q D Q S S A S S G H S S P S S S S S A A A F Q A M S A A K F G
 
AT1G70000.1     S N G D S I M G V A
gm000561_Glyma0    S G G D S I I S V A
 
0