fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G70000.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm000561 not found in 300aa AT1G70000.1 1st_1st 0.557919621 Ia
Gm002840 not found in 300aa AT1G70000.1 not_1st 0.541371158 II
Gm022860 DLSGKSLSLKLPVSKP in 178/206 AT1G70000.1 not_1st 0.416075650 II
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Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT1G70000.1     MSRSCSQCGNNGHNSRTCPTDITTTGDNNDKGGG--------EKAIMLFGVRVTEASS--
gm022860_Glyma0 ------MC-------------------------------SAEKDGIMLFGVRLSVVDNHP
gm002840_Glyma0 MSRTCSLCGNNGHNSRTC----------TDGGAAASCGGSPRENGIMLFGVRVMTEAN--
gm000561_Glyma0 MSRTCSQCGNNGHNSRTC----------TDGGAA----GSPRENGIMLFGVRVMTEAN--
                       *                                  :..*******:    .  

AT1G70000.1     SCFRKSVSMNNLSQFDQTPDPNPTDDGGYASDDVVHASGRNRERKRGTPWTEEEHRLFLT
gm022860_Glyma0 TSFRKSASMTNLSQYESPPPHDP--NAGYASDDVVHPSRHTRERKRGVPWTEEEHRLFLL
gm002840_Glyma0 SSFRKSASMNNLSQYDA-ESNAA--DAGYASDDVVHASGRTRERKRGVPWTEEEHRLFLL
gm000561_Glyma0 SSFRKSASMNNLSQYDA-EFNAA--DAGYASDDVVHASGRTRERKRGVPWTEEEHRLFLL
                :.****.**.****::      .  :.*********.* :.******.*********** 

AT1G70000.1     GLHKVGKGDWRGISRNFVKTRTPTQVASHAQKYFLRRTNQNRRRRRSSLFDITPDSFIGS
gm022860_Glyma0 GLQNIGKGDWRGISRNFVKTRTPTQVASHAQKYFLRRHTQNRRRRRSSLFDITTDSVMEP
gm002840_Glyma0 GLHKVGKGDWRGISRNFVKTRTPTQVASHAQKYFLRRHNQNRRRRRSSLFDITTDTVMES
gm000561_Glyma0 GLHKVGKGDWRGISRNFVKTRTPTQVASHAQKYFLRRHNQNRRRRRSSLFDITTDTVMES
                **:::******************************** .**************.*:.: .

AT1G70000.1     S--KEENQ---------------------------------LQTPLE------LIRPVPI
gm022860_Glyma0 WPEKEEEQ---------------------------------VVLPSA--------RSKPV
gm002840_Glyma0 STIMEEEQVPQETMAAPIPAAYPP-----FPGAGFPMSLSPVVLPVSGERLTKPIRPTPI
gm000561_Glyma0 STIMEEEQVPPETVAAPLPAAYPPSHYGAFAGAGFP--IAPVVLPVSGERLTKPIRPTPI
                    **:*                                 :  *          *. *:

AT1G70000.1     PIPIPPSRKMADLNLNKKKTPAT-TEMFPLSLNLQRPSS----STSSSSNEQKARGSRAS
gm022860_Glyma0 -LPVPPSSKMAELDLSGKS----------LSLKLPVSKP--------------P------
gm002840_Glyma0 -VPVPPSSKMANLNLKGKASRTNLIEPLPLSLNLPSPTPRSQDQSPANSGHSSP-SSSSA
gm000561_Glyma0 -LPVPPSSKMANLNLKEKASPTNLIEPLPLSLNLPSPTPRSQDQSSASSGHSSPSSSSSA
                 :*:*** ***:*:*. *           ***:*  ...              .      

AT1G70000.1     SGFEAMSSN-----GDSIMGVA
gm022860_Glyma0 -----ISNENFGGIPLSVLLEG
gm002840_Glyma0 AAFQAMSAAKFGGGGDSIISVA
gm000561_Glyma0 AAFQAMSAAKFGSGGDSIISVA
                     :*         *::  .
BoxShade v3.31 C (beta, 970507) Output
AT1G70000.1     M S R S C S Q C G N N G H N S R T C P T D I T T T G D N N D K G G G - - - - - - - - E K A I M L F G V R V T E A S S - -
gm022860_Glyma0    - - - - - - M C - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - S A E K D G I M L F G V R L S V V D N H P
gm002840_Glyma0    M S R T C S L C G N N G H N S R T C - - - - - - - - - - T D G G A A A S C G G S P R E N G I M L F G V R V M T E A N - -
gm000561_Glyma0    M S R T C S Q C G N N G H N S R T C - - - - - - - - - - T D G G A A - - - - G S P R E N G I M L F G V R V M T E A N - -
 
AT1G70000.1     S C F R K S V S M N N L S Q F D Q T P D P N P T D D G G Y A S D D V V H A S G R N R E R K R G T P W T E E E H R L F L T
gm022860_Glyma0    T S F R K S A S M T N L S Q Y E S P P P H D P - - N A G Y A S D D V V H P S R H T R E R K R G V P W T E E E H R L F L L
gm002840_Glyma0    S S F R K S A S M N N L S Q Y D A - E S N A A - - D A G Y A S D D V V H A S G R T R E R K R G V P W T E E E H R L F L L
gm000561_Glyma0    S S F R K S A S M N N L S Q Y D A - E F N A A - - D A G Y A S D D V V H A S G R T R E R K R G V P W T E E E H R L F L L
 
AT1G70000.1     G L H K V G K G D W R G I S R N F V K T R T P T Q V A S H A Q K Y F L R R T N Q N R R R R R S S L F D I T P D S F I G S
gm022860_Glyma0    G L Q N I G K G D W R G I S R N F V K T R T P T Q V A S H A Q K Y F L R R H T Q N R R R R R S S L F D I T T D S V M E P
gm002840_Glyma0    G L H K V G K G D W R G I S R N F V K T R T P T Q V A S H A Q K Y F L R R H N Q N R R R R R S S L F D I T T D T V M E S
gm000561_Glyma0    G L H K V G K G D W R G I S R N F V K T R T P T Q V A S H A Q K Y F L R R H N Q N R R R R R S S L F D I T T D T V M E S
 
AT1G70000.1     S - - K E E N Q - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - L Q T P L E - - - - - - L I R P V P I
gm022860_Glyma0    W P E K E E E Q - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - V V L P S A - - - - - - - - R S K P V
gm002840_Glyma0    S T I M E E E Q V P Q E T M A A P I P A A Y P P - - - - - F P G A G F P M S L S P V V L P V S G E R L T K P I R P T P I
gm000561_Glyma0    S T I M E E E Q V P P E T V A A P L P A A Y P P S H Y G A F A G A G F P - - I A P V V L P V S G E R L T K P I R P T P I
 
AT1G70000.1     P I P I P P S R K M A D L N L N K K K T P A T - T E M F P L S L N L Q R P S S - - - - S T S S S S N E Q K A R G S R A S
gm022860_Glyma0    - L P V P P S S K M A E L D L S G K S - - - - - - - - - - L S L K L P V S K P - - - - - - - - - - - - - - P - - - - - -
gm002840_Glyma0    - V P V P P S S K M A N L N L K G K A S R T N L I E P L P L S L N L P S P T P R S Q D Q S P A N S G H S S P - S S S S A
gm000561_Glyma0    - L P V P P S S K M A N L N L K E K A S P T N L I E P L P L S L N L P S P T P R S Q D Q S S A S S G H S S P S S S S S A
 
AT1G70000.1     S G F E A M S S N - - - - - G D S I M G V A
gm022860_Glyma0    - - - - - I S N E N F G G I P L S V L L E G
gm002840_Glyma0    A A F Q A M S A A K F G G G G D S I I S V A
gm000561_Glyma0    A A F Q A M S A A K F G S G G D S I I S V A
 
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