fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G70510.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt042564 SVSGQSLSLSLFPGKD in 183/341 AT1G23380.1 1st_not 0.516666666 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G70510.1     MDRMCGFRST-EDYSEKA-----TLMMPSDYQSLICSTTGDNQR--LFGSDEL---ATAL
pt042564_POPTR_ MEGTYGLHSTVADYSDKALMSPENLILTTEYQSLLSSETF-RQRIPIQGSQELLSEAASI
                *:   *::**  ***:**     .*::.::****:.* *  .**  : **:**   *:::

AT1G70510.1     SSELLPRIRKAEDNFSLSVIKSKIASHPLYPRLLQTYIDCQKVGAPMEIACILEEIQREN
pt042564_POPTR_ TTEI-----QREGDMS-SLVKAKIASHPSYPRLLEAYIDCQKVGAPPQIARFLDEIRREN
                ::*:     : *.::* *::*:****** *****::********** :** :*:**:***

AT1G70510.1     HVYKRDVAPLSCFGADPELDEFMETYCDILVKYKTDLARPFDEATTFINKIEMQLQNLCT
pt042564_POPTR_ DLFKHD-AVSTYWGADPELDEFMETYCDLLVKYKSDLERPFDEATTFLNKIEMQFRNICT
                .::*:* *  : :***************:*****:** *********:******::*:**

AT1G70510.1     GPA----SATALS------------------------DDGAVSSDEELREDDDIAADDSQ
pt042564_POPTR_ AASIRSVSGQSLSLSLFPGKDPLGSELLNNISRNHNGSDGAPSSDDEL-SGGEMDMHEAQ
                ..:    *. :**                        .*** ***:** ...::  .::*

AT1G70510.1     QRSNDRDLKDQLLRKFGSHISSLKLEFSKKKKKGKLPREARQALLDWWNVHNKWPYPTEG
pt042564_POPTR_ PSGEDRELKDKLLRRFGGHIGTLKREFSKKKKKGKLPKEARQTLLGWWNVHYKWPYPTEA
                  .:**:***:***:**.**.:** ************:****:**.***** *******.

AT1G70510.1     DKISLAEETGLDQKQINNWFINQRKRHWKPSENMPFDMMDDSNETFFTE-
pt042564_POPTR_ DKLALAESTGLDQKQINNWFINQRKRHWKPSENLQFAVMNNLSGQFLAED
                **::***.*************************: * :*:: .  *::*
BoxShade v3.31 C (beta, 970507) Output
AT1G70510.1     M D R M C G F R S T - E D Y S E K A - - - - - T L M M P S D Y Q S L I C S T T G D N Q R - - L F G S D E L - - - A T A L
pt042564_POPTR_    M E G T Y G L H S T V A D Y S D K A L M S P E N L I L T T E Y Q S L L S S E T F - R Q R I P I Q G S Q E L L S E A A S I
 
AT1G70510.1     S S E L L P R I R K A E D N F S L S V I K S K I A S H P L Y P R L L Q T Y I D C Q K V G A P M E I A C I L E E I Q R E N
pt042564_POPTR_    T T E I - - - - - Q R E G D M S - S L V K A K I A S H P S Y P R L L E A Y I D C Q K V G A P P Q I A R F L D E I R R E N
 
AT1G70510.1     H V Y K R D V A P L S C F G A D P E L D E F M E T Y C D I L V K Y K T D L A R P F D E A T T F I N K I E M Q L Q N L C T
pt042564_POPTR_    D L F K H D - A V S T Y W G A D P E L D E F M E T Y C D L L V K Y K S D L E R P F D E A T T F L N K I E M Q F R N I C T
 
AT1G70510.1     G P A - - - - S A T A L S - - - - - - - - - - - - - - - - - - - - - - - - D D G A V S S D E E L R E D D D I A A D D S Q
pt042564_POPTR_    A A S I R S V S G Q S L S L S L F P G K D P L G S E L L N N I S R N H N G S D G A P S S D D E L - S G G E M D M H E A Q
 
AT1G70510.1     Q R S N D R D L K D Q L L R K F G S H I S S L K L E F S K K K K K G K L P R E A R Q A L L D W W N V H N K W P Y P T E G
pt042564_POPTR_    P S G E D R E L K D K L L R R F G G H I G T L K R E F S K K K K K G K L P K E A R Q T L L G W W N V H Y K W P Y P T E A
 
AT1G70510.1     D K I S L A E E T G L D Q K Q I N N W F I N Q R K R H W K P S E N M P F D M M D D S N E T F F T E -
pt042564_POPTR_    D K L A L A E S T G L D Q K Q I N N W F I N Q R K R H W K P S E N L Q F A V M N N L S G Q F L A E D
 
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