fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G70510.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm000457 not found in 316aa AT1G23380.1 not_not 0.566666666 III
Gm002941 not found in 308aa AT1G23380.1 not_not 0.566666666 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT1G70510.1     MDRMCGFRSTEDYSEKA-----TLMMPSDYQSLICSTTGDNQRLFGSDELATALSSELLP
gm002941_Glyma0 MDGMYGVPA--EYADKALMTPENLIFPPDYHHDFLA--AGRIPLFGSDEFFS--SSAGIH
gm000457_Glyma0 MDGMYGVPP--EYADKALMTPENLIFPPDYHHAFLS--AGRIPLFGSDELFS--SADGIH
                ** * *. .  :*::**     .*::*.**:  : :  ...  ******: :  *:  : 

AT1G70510.1     RIRKAEDNFSLSVIKSKIASHPLYPRLLQTYIDCQKVGAPMEIACILEEIQRENHVYKRD
gm002941_Glyma0 RQQ-EDDVAATTVMKAKIASHPHYPRLLQAYIECQKVGAPPEIARLLEEIRRENDPCKSD
gm000457_Glyma0 RQQDEDDVATTTVMKAKIASHPQYSRLLQAYIDCQKVGAPPEIARLLEEIRRENDLCKSD
                * :  :*  : :*:*:****** *.****:**:******* *** :****:***.  * *

AT1G70510.1     -VAPLSCFGADPELDEFMETYCDILVKYKTDLARPFDEATTFINKIEMQLQNLCTGPASA
gm002941_Glyma0 AVSSSTCFGADPELDEFMEAYCDMLVKYKSDLARPFDEATTFLNKIEMQLSHLCTG-ASV
gm000457_Glyma0 VVSSSTCFGADPELDEFMETYCDMLVKYKSDLARPFEEATTFLNKIEMQLSHLCTG-ASV
                 *:. :*************:***:*****:******:*****:*******.:**** **.

AT1G70510.1     T-------ALSDDGAVSSDEELREDDDIAADDSQQRSNDRDLKDQLLRKFGSHISSLKLE
gm002941_Glyma0 S-------NVSDDGGVSSDEDLSTGDG-DAQDGQLKGEDRELKDRLLRKFGSHIGTLKLE
gm000457_Glyma0 SNVSVIARNVSNDGGVSSDEDLSTGDG-DAQDGQLKGEDRELKDRLLRKFGSHIGTLKLE
                :        :*:**.*****:*  .*.  *:*.* :.:**:***:*********.:****

AT1G70510.1     FSKKKKKGKLPREARQALLDWWNVHNKWPYPTEGDKISLAEETGLDQKQINNWFINQRKR
gm002941_Glyma0 FSKKKKKGKLPKEARQALLQWWNVHYKWPYPTEADKIELAKSTGLDQKQINNWFINQRKR
gm000457_Glyma0 FSKKKKKGKLPKEARQTLLQWWNVHYKWPYPTEADKIELAKSTGLDQKQINNWFINQRKR
                ***********:****:**:***** *******.***.**:.******************

AT1G70510.1     HWKPSENMPFDMMDDSNETFFTE-
gm002941_Glyma0 HWKPSENMQFSMMENFNGRILADE
gm000457_Glyma0 HWKPSENMQFSMMENLNGRFLADE
                ******** *.**:: *  ::::
BoxShade v3.31 C (beta, 970507) Output
AT1G70510.1     M D R M C G F R S T E D Y S E K A - - - - - T L M M P S D Y Q S L I C S T T G D N Q R L F G S D E L A T A L S S E L L P
gm002941_Glyma0    M D G M Y G V P A - - E Y A D K A L M T P E N L I F P P D Y H H D F L A - - A G R I P L F G S D E F F S - - S S A G I H
gm000457_Glyma0    M D G M Y G V P P - - E Y A D K A L M T P E N L I F P P D Y H H A F L S - - A G R I P L F G S D E L F S - - S A D G I H
 
AT1G70510.1     R I R K A E D N F S L S V I K S K I A S H P L Y P R L L Q T Y I D C Q K V G A P M E I A C I L E E I Q R E N H V Y K R D
gm002941_Glyma0    R Q Q - E D D V A A T T V M K A K I A S H P H Y P R L L Q A Y I E C Q K V G A P P E I A R L L E E I R R E N D P C K S D
gm000457_Glyma0    R Q Q D E D D V A T T T V M K A K I A S H P Q Y S R L L Q A Y I D C Q K V G A P P E I A R L L E E I R R E N D L C K S D
 
AT1G70510.1     - V A P L S C F G A D P E L D E F M E T Y C D I L V K Y K T D L A R P F D E A T T F I N K I E M Q L Q N L C T G P A S A
gm002941_Glyma0    A V S S S T C F G A D P E L D E F M E A Y C D M L V K Y K S D L A R P F D E A T T F L N K I E M Q L S H L C T G - A S V
gm000457_Glyma0    V V S S S T C F G A D P E L D E F M E T Y C D M L V K Y K S D L A R P F E E A T T F L N K I E M Q L S H L C T G - A S V
 
AT1G70510.1     T - - - - - - - A L S D D G A V S S D E E L R E D D D I A A D D S Q Q R S N D R D L K D Q L L R K F G S H I S S L K L E
gm002941_Glyma0    S - - - - - - - N V S D D G G V S S D E D L S T G D G - D A Q D G Q L K G E D R E L K D R L L R K F G S H I G T L K L E
gm000457_Glyma0    S N V S V I A R N V S N D G G V S S D E D L S T G D G - D A Q D G Q L K G E D R E L K D R L L R K F G S H I G T L K L E
 
AT1G70510.1     F S K K K K K G K L P R E A R Q A L L D W W N V H N K W P Y P T E G D K I S L A E E T G L D Q K Q I N N W F I N Q R K R
gm002941_Glyma0    F S K K K K K G K L P K E A R Q A L L Q W W N V H Y K W P Y P T E A D K I E L A K S T G L D Q K Q I N N W F I N Q R K R
gm000457_Glyma0    F S K K K K K G K L P K E A R Q T L L Q W W N V H Y K W P Y P T E A D K I E L A K S T G L D Q K Q I N N W F I N Q R K R
 
AT1G70510.1     H W K P S E N M P F D M M D D S N E T F F T E -
gm002941_Glyma0    H W K P S E N M Q F S M M E N F N G R I L A D E
gm000457_Glyma0    H W K P S E N M Q F S M M E N L N G R F L A D E
 
0