fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G71450.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm002384 not found in 213aa AT1G33760.1 1st_not 0.430481283 II
Pt028408 not found in 180aa AT1G71450.1 not_1st 0.510695187 II
Pt014630 not found in 180aa AT1G71450.1 not_1st 0.510695187 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT1G71450.1     MAG---LRNSGNSDKAQNDGK------GVPSAYRGVRKRKWGKWVSEIREPGTKNRIWLG
pt014630_POPTR_ MEE----RN-----TASHGGM--------SSSYRGVRKRKWGKWVSEIREPGKKSRIWLG
gm002384_Glyma0 MDQETTRRN-----TMQECHVIAPTTTTATSSYRGVRQRKWGKWVSEIREPGKKSRIWLG
pt028408_POPTR_ MEG----RNS----TAHHGGI--------ASSYTGVRKRKWGKWVSEIREPEKKTRIWLG
                *      **     .  .           .*:* ***:************* .*.*****

AT1G71450.1     SFETPEMAATAYDVAAFHFRGREARLNFPELASSLPRPADSSSDSIRMAVHEATLCRTTE
pt014630_POPTR_ SFETPEMAATAYDVAALHFRGYDAKLNFPDLVHSLPKPASSDAEDIRIAAHEAAMSLR--
gm002384_Glyma0 SYESPEMAAAAYDVAALHLRGRAARLNFPELVETLPRPTSSKPEDVQVAAQQAAVMFRIS
pt028408_POPTR_ SFETPEMAAAAYDVAALHFRGCEAKLNFPELAGKLPMPASSSADHIRMAAHQAAVSLR--
                *:*:*****:******:*:**  *:****:*. .** *:.*..: :::*.::*::     

AT1G71450.1     GTESAMQVDS--SSSSN-----VAPTMVRLSPREIQAINESTLGSPTTMM----------
pt014630_POPTR_ P--STVESSQGGSSSSN-----VGPITVRLSPSQIQAINESPLDSPKMWM-QMSG---IA
gm002384_Glyma0 PTMSPINNHQGCVNDNNIIKGSVVPVRVGLSPTQIQAINESPLDSPKMWMVQMAEALRFG
pt028408_POPTR_ P--STVDSSQGGSSSSN-----VGPITVRLSPSQIQAIHESPLDSPKMWM-QMAE---IA
                   *.::  .   ...*     * *  * *** :****:**.*.**.  *          

AT1G71450.1     ---HSTYDPMEFANDV-------EMNAWETYQSDFLWDP----
pt014630_POPTR_ MPDESM---IYSSIDVGEEEE------WDNKQTDSLWDP----
gm002384_Glyma0 FDDHSM---MMLPSD--DDDYALELSGWEEIQHESLWDSPEYM
pt028408_POPTR_ TLEESS---MMFSDDI-EDDE------WDNNQTDSLWGP----
                   .*    :  . *            *:  * : **..
BoxShade v3.31 C (beta, 970507) Output
AT1G71450.1     M A G - - - L R N S G N S D K A Q N D G K - - - - - - G V P S A Y R G V R K R K W G K W V S E I R E P G T K N R I W L G
pt014630_POPTR_    M E E - - - - R N - - - - - T A S H G G M - - - - - - - - S S S Y R G V R K R K W G K W V S E I R E P G K K S R I W L G
gm002384_Glyma0    M D Q E T T R R N - - - - - T M Q E C H V I A P T T T T A T S S Y R G V R Q R K W G K W V S E I R E P G K K S R I W L G
pt028408_POPTR_    M E G - - - - R N S - - - - T A H H G G I - - - - - - - - A S S Y T G V R K R K W G K W V S E I R E P E K K T R I W L G
 
AT1G71450.1     S F E T P E M A A T A Y D V A A F H F R G R E A R L N F P E L A S S L P R P A D S S S D S I R M A V H E A T L C R T T E
pt014630_POPTR_    S F E T P E M A A T A Y D V A A L H F R G Y D A K L N F P D L V H S L P K P A S S D A E D I R I A A H E A A M S L R - -
gm002384_Glyma0    S Y E S P E M A A A A Y D V A A L H L R G R A A R L N F P E L V E T L P R P T S S K P E D V Q V A A Q Q A A V M F R I S
pt028408_POPTR_    S F E T P E M A A A A Y D V A A L H F R G C E A K L N F P E L A G K L P M P A S S S A D H I R M A A H Q A A V S L R - -
 
AT1G71450.1     G T E S A M Q V D S - - S S S S N - - - - - V A P T M V R L S P R E I Q A I N E S T L G S P T T M M - - - - - - - - - -
pt014630_POPTR_    P - - S T V E S S Q G G S S S S N - - - - - V G P I T V R L S P S Q I Q A I N E S P L D S P K M W M - Q M S G - - - I A
gm002384_Glyma0    P T M S P I N N H Q G C V N D N N I I K G S V V P V R V G L S P T Q I Q A I N E S P L D S P K M W M V Q M A E A L R F G
pt028408_POPTR_    P - - S T V D S S Q G G S S S S N - - - - - V G P I T V R L S P S Q I Q A I H E S P L D S P K M W M - Q M A E - - - I A
 
AT1G71450.1     - - - H S T Y D P M E F A N D V - - - - - - - E M N A W E T Y Q S D F L W D P - - - -
pt014630_POPTR_    M P D E S M - - - I Y S S I D V G E E E E - - - - - - W D N K Q T D S L W D P - - - -
gm002384_Glyma0    F D D H S M - - - M M L P S D - - D D D Y A L E L S G W E E I Q H E S L W D S P E Y M
pt028408_POPTR_    T L E E S S - - - M M F S D D I - E D D E - - - - - - W D N N Q T D S L W G P - - - -
 
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