fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G71450.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt013002 not found in 185aa AT1G33760.1 not_not 0.446524064 III
Pt015543 not found in 188aa AT1G33760.1 not_not 0.427807486 III
Pt011329 not found in 189aa AT1G33760.1 not_not 0.419786096 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT1G71450.1     MAGLRNSGNSDKAQNDGKGVPSAYRGVRKRKWGKWVSEIREPGTKNRIWLGSFETPEMAA
pt011329_POPTR_ MEGRSRDAHGDQIS------TPRYRGIRQRKWGTWVSEIREPGQKTRIWLGSYEKPEMAA
pt013002_POPTR_ MEGRIRDGHLG-IS------PPRYRGVRQRKWGKWVSEIREPGKKTRIWLGSYEIPEMAA
pt015543_POPTR_ MEGRTRDGHPG-IS------QPRYRGVRQRKWGKWVSEIREPGKKTRIWLGSYEMPEMAA
                * *  ...: .  .       . ***:*:****.********* *.******:* *****

AT1G71450.1     TAYDVAAFHFRGREARLNFPELASSLPRPADSSSDSIRMAVHEATLCRTTEGTESAMQVD
pt011329_POPTR_ VAYDVAALHLRGRGAQLNFPEMEDSLPRPASSRAEDVQAAAREAALLFSTGPVKCSDIVS
pt013002_POPTR_ AAYDVAALHLRGRGAQLNFPEMVDILPQPASSSAEDVQMAAQEAALMFRR-PMKCSEAVS
pt015543_POPTR_ AAYDVAALHLRGRGAQLNFPEMVDSLPRPASSSTEDVQMAAQEAALLFRR-PIKCSEGVS
                .******:*:*** *:*****: . **:**.* ::.:: *.:**:*       :.:  *.

AT1G71450.1     -SSSSSN---VAPTMVRLSPREIQAINESTLGSPTTMMH------STYDPMEFANDVEMN
pt011329_POPTR_ CGSITSDGG-FGPVRVGLSPSQIQAINEAPLDSPKMWTEYLAESLLTGEPMAMENDIGVG
pt013002_POPTR_ -GDSSVGGG-LGPVRVGLSPSQIQAINEAPLDSPKMWME-LAGALLLEEPMIMSDDIDVA
pt015543_POPTR_ -GSSSGGGGSLGPVRVGLSPSQIQAINEAPLDSPKMWME-LAGALLLDEPVAMGDDIDVE
                 .. : .   ..*. * *** :******:.*.**.   .         :*: : :*: : 

AT1G71450.1     ---AWETY--QSDFLWDP-
pt011329_POPTR_ YS-EWEEI--QQESIWGYY
pt013002_POPTR_ YRDEWGEM--QHDSIWDY-
pt015543_POPTR_ LSDEWGEMEHEHDSIWDY-
                    *     : : :*.
BoxShade v3.31 C (beta, 970507) Output
AT1G71450.1     M A G L R N S G N S D K A Q N D G K G V P S A Y R G V R K R K W G K W V S E I R E P G T K N R I W L G S F E T P E M A A
pt011329_POPTR_    M E G R S R D A H G D Q I S - - - - - - T P R Y R G I R Q R K W G T W V S E I R E P G Q K T R I W L G S Y E K P E M A A
pt013002_POPTR_    M E G R I R D G H L G - I S - - - - - - P P R Y R G V R Q R K W G K W V S E I R E P G K K T R I W L G S Y E I P E M A A
pt015543_POPTR_    M E G R T R D G H P G - I S - - - - - - Q P R Y R G V R Q R K W G K W V S E I R E P G K K T R I W L G S Y E M P E M A A
 
AT1G71450.1     T A Y D V A A F H F R G R E A R L N F P E L A S S L P R P A D S S S D S I R M A V H E A T L C R T T E G T E S A M Q V D
pt011329_POPTR_    V A Y D V A A L H L R G R G A Q L N F P E M E D S L P R P A S S R A E D V Q A A A R E A A L L F S T G P V K C S D I V S
pt013002_POPTR_    A A Y D V A A L H L R G R G A Q L N F P E M V D I L P Q P A S S S A E D V Q M A A Q E A A L M F R R - P M K C S E A V S
pt015543_POPTR_    A A Y D V A A L H L R G R G A Q L N F P E M V D S L P R P A S S S T E D V Q M A A Q E A A L L F R R - P I K C S E G V S
 
AT1G71450.1     - S S S S S N - - - V A P T M V R L S P R E I Q A I N E S T L G S P T T M M H - - - - - - S T Y D P M E F A N D V E M N
pt011329_POPTR_    C G S I T S D G G - F G P V R V G L S P S Q I Q A I N E A P L D S P K M W T E Y L A E S L L T G E P M A M E N D I G V G
pt013002_POPTR_    - G D S S V G G G - L G P V R V G L S P S Q I Q A I N E A P L D S P K M W M E - L A G A L L L E E P M I M S D D I D V A
pt015543_POPTR_    - G S S S G G G G S L G P V R V G L S P S Q I Q A I N E A P L D S P K M W M E - L A G A L L L D E P V A M G D D I D V E
 
AT1G71450.1     - - - A W E T Y - - Q S D F L W D P -
pt011329_POPTR_    Y S - E W E E I - - Q Q E S I W G Y Y
pt013002_POPTR_    Y R D E W G E M - - Q H D S I W D Y -
pt015543_POPTR_    L S D E W G E M E H E H D S I W D Y -
 
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