fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G71450.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt013233 not found in 175aa AT1G71450.1 1st_1st 0.532085561 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G71450.1     MAGLRNSGNSDKAQNDGKGVPSAYRGVRKRKWGKWVSEIREPGTKNRIWLGSFETPEMAA
pt013233_POPTR_ -MEERNTG----------GVSSSYRGVRKRKWGKWVSEIREPGKKNRIWLGSFETPEMAA
                    **:*          **.*:********************.****************

AT1G71450.1     TAYDVAAFHFRGREARLNFPELASSLPRPADSSSDSIRMAVHEATLCRTTEGTESAMQVD
pt013233_POPTR_ AAYDVAALHFRGHDARVNFPDLVHDLPKPTSSSSEDIRMAAHEAAMSLRPFTAESSH--G
                :******:****::**:***:*. .**:*:.***:.****.***::.  .  :**:   .

AT1G71450.1     SSSSSNVAPTMVRLSPREIQAINESTLGSPTTMMHST-----YDPMEFANDVEMNAWETY
pt013233_POPTR_ GSSTSNVGPITVRLSASQIQAINESPLDSPKMWMHMSEIAILEESMVFSNNIEEDEWDNK
                .**:***.*  ****. :*******.*.**.  ** :      :.* *:*::* : *:. 

AT1G71450.1     QSDFLWDP
pt013233_POPTR_ QTYSLWDP
                *:  ****
BoxShade v3.31 C (beta, 970507) Output
AT1G71450.1     M A G L R N S G N S D K A Q N D G K G V P S A Y R G V R K R K W G K W V S E I R E P G T K N R I W L G S F E T P E M A A
pt013233_POPTR_    - M E E R N T G - - - - - - - - - - G V S S S Y R G V R K R K W G K W V S E I R E P G K K N R I W L G S F E T P E M A A
 
AT1G71450.1     T A Y D V A A F H F R G R E A R L N F P E L A S S L P R P A D S S S D S I R M A V H E A T L C R T T E G T E S A M Q V D
pt013233_POPTR_    A A Y D V A A L H F R G H D A R V N F P D L V H D L P K P T S S S S E D I R M A A H E A A M S L R P F T A E S S H - - G
 
AT1G71450.1     S S S S S N V A P T M V R L S P R E I Q A I N E S T L G S P T T M M H S T - - - - - Y D P M E F A N D V E M N A W E T Y
pt013233_POPTR_    G S S T S N V G P I T V R L S A S Q I Q A I N E S P L D S P K M W M H M S E I A I L E E S M V F S N N I E E D E W D N K
 
AT1G71450.1     Q S D F L W D P
pt013233_POPTR_    Q T Y S L W D P
 
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