fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G71450.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm002384 not found in 213aa AT1G33760.1 1st_not 0.430481283 II
Pt013233 not found in 175aa AT1G71450.1 1st_1st 0.532085561 Ia
Pt028408 not found in 180aa AT1G71450.1 not_1st 0.510695187 II
Pt014630 not found in 180aa AT1G71450.1 not_1st 0.510695187 II
Pt013002 not found in 185aa AT1G33760.1 not_not 0.446524064 III
Pt015543 not found in 188aa AT1G33760.1 not_not 0.427807486 III
Pt011329 not found in 189aa AT1G33760.1 not_not 0.419786096 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT1G71450.1     --MAGLRNSGNSD--KAQNDGKGVPSAYRGVRKRKWGKWVSEIREPGTKNRIWLGSFETP
pt011329_POPTR_ --MEGRSRDAHGD--------QISTPRYRGIRQRKWGTWVSEIREPGQKTRIWLGSYEKP
pt013002_POPTR_ --MEGRIRDGHLG---------ISPPRYRGVRQRKWGKWVSEIREPGKKTRIWLGSYEIP
pt015543_POPTR_ --MEGRTRDGHPG---------ISQPRYRGVRQRKWGKWVSEIREPGKKTRIWLGSYEMP
pt013233_POPTR_ --MEERNT----G---------GVSSSYRGVRKRKWGKWVSEIREPGKKNRIWLGSFETP
gm002384_Glyma0 MDQETTRRNTMQECHVIAPTTTTATSSYRGVRQRKWGKWVSEIREPGKKSRIWLGSYESP
pt028408_POPTR_ --MEGRNSTAHHG---------GIASSYTGVRKRKWGKWVSEIREPEKKTRIWLGSFETP
pt014630_POPTR_ --MEERNTAS-HG---------GMSSSYRGVRKRKWGKWVSEIREPGKKSRIWLGSFETP
                                         . * *:*:****.********  *.******:* *

AT1G71450.1     EMAATAYDVAAFHFRGREARLNFPELASSLPRPADSSSDSIRMAVHEATLCRTTE---GT
pt011329_POPTR_ EMAAVAYDVAALHLRGRGAQLNFPEMEDSLPRPASSRAEDVQAAAREAALLFST----GP
pt013002_POPTR_ EMAAAAYDVAALHLRGRGAQLNFPEMVDILPQPASSSAEDVQMAAQEAALMFRR-----P
pt015543_POPTR_ EMAAAAYDVAALHLRGRGAQLNFPEMVDSLPRPASSSTEDVQMAAQEAALLFRR-----P
pt013233_POPTR_ EMAAAAYDVAALHFRGHDARVNFPDLVHDLPKPTSSSSEDIRMAAHEAAMSLRP----FT
gm002384_Glyma0 EMAAAAYDVAALHLRGRAARLNFPELVETLPRPTSSKPEDVQVAAQQAAVMFRISPTMSP
pt028408_POPTR_ EMAAAAYDVAALHFRGCEAKLNFPELAGKLPMPASSSADHIRMAAHQAAVSLRP----ST
pt014630_POPTR_ EMAATAYDVAALHFRGYDAKLNFPDLVHSLPKPASSDAEDIRIAAHEAAMSLRP----ST
                ****.******:*:**  *::***::   ** *:.* .: :: *.::*::         .

AT1G71450.1     ESAMQVDSSSSSN-----VAPTMVRLSPREIQAINESTLGSPTTMMH---------STYD
pt011329_POPTR_ VKCSDIVSCGSITSDGG-FGPVRVGLSPSQIQAINEAPLDSPKMWTEYLAESL---LTGE
pt013002_POPTR_ MKCSEAVS-GDSSVGGG-LGPVRVGLSPSQIQAINEAPLDSPKMWME-LAGAL---LLEE
pt015543_POPTR_ IKCSEGVS-GSSSGGGGSLGPVRVGLSPSQIQAINEAPLDSPKMWME-LAGAL---LLDE
pt013233_POPTR_ AESSHGGS-STSN-----VGPITVRLSASQIQAINESPLDSPKMWMH-MSEIA---ILEE
gm002384_Glyma0 INNHQGCV-NDNNIIKGSVVPVRVGLSPTQIQAINESPLDSPKMWMVQMAEALRFGFDDH
pt028408_POPTR_ VDSSQGGS-SSSN-----VGPITVRLSPSQIQAIHESPLDSPKMWMQ-MAEIA---TLEE
pt014630_POPTR_ VESSQGGS-SSSN-----VGPITVRLSPSQIQAINESPLDSPKMWMQ-MSGIA---MPDE
                 .  .    .  .     . *  * **. :****:*:.*.**.                .

AT1G71450.1     PMEF----ANDVEM---NAWETY--QSDFLWDP----
pt011329_POPTR_ PMAM----ENDIGVGYS-EWEEI--QQESIWGYY---
pt013002_POPTR_ PMIM----SDDIDVAYRDEWGEM--QHDSIWDY----
pt015543_POPTR_ PVAM----GDDIDVELSDEWGEMEHEHDSIWDY----
pt013233_POPTR_ -SMV----FSN-NI-EEDEWDNK--QTYSLWDP----
gm002384_Glyma0 SMMMLPSDDDDYALELS-GWEEI--QHESLWDSPEYM
pt028408_POPTR_ SSMM----FSD-DI-EDDEWDNN--QTDSLWGP----
pt014630_POPTR_ -SMI----YSSIDVGEEEEWDNK--QTDSLWDP----
                   .     ..  :     *     :   :*.
BoxShade v3.31 C (beta, 970507) Output
AT1G71450.1     - - M A G L R N S G N S D - - K A Q N D G K G V P S A Y R G V R K R K W G K W V S E I R E P G T K N R I W L G S F E T P
pt011329_POPTR_    - - M E G R S R D A H G D - - - - - - - - Q I S T P R Y R G I R Q R K W G T W V S E I R E P G Q K T R I W L G S Y E K P
pt013002_POPTR_    - - M E G R I R D G H L G - - - - - - - - - I S P P R Y R G V R Q R K W G K W V S E I R E P G K K T R I W L G S Y E I P
pt015543_POPTR_    - - M E G R T R D G H P G - - - - - - - - - I S Q P R Y R G V R Q R K W G K W V S E I R E P G K K T R I W L G S Y E M P
pt013233_POPTR_    - - M E E R N T - - - - G - - - - - - - - - G V S S S Y R G V R K R K W G K W V S E I R E P G K K N R I W L G S F E T P
gm002384_Glyma0    M D Q E T T R R N T M Q E C H V I A P T T T T A T S S Y R G V R Q R K W G K W V S E I R E P G K K S R I W L G S Y E S P
pt028408_POPTR_    - - M E G R N S T A H H G - - - - - - - - - G I A S S Y T G V R K R K W G K W V S E I R E P E K K T R I W L G S F E T P
pt014630_POPTR_    - - M E E R N T A S - H G - - - - - - - - - G M S S S Y R G V R K R K W G K W V S E I R E P G K K S R I W L G S F E T P
 
AT1G71450.1     E M A A T A Y D V A A F H F R G R E A R L N F P E L A S S L P R P A D S S S D S I R M A V H E A T L C R T T E - - - G T
pt011329_POPTR_    E M A A V A Y D V A A L H L R G R G A Q L N F P E M E D S L P R P A S S R A E D V Q A A A R E A A L L F S T - - - - G P
pt013002_POPTR_    E M A A A A Y D V A A L H L R G R G A Q L N F P E M V D I L P Q P A S S S A E D V Q M A A Q E A A L M F R R - - - - - P
pt015543_POPTR_    E M A A A A Y D V A A L H L R G R G A Q L N F P E M V D S L P R P A S S S T E D V Q M A A Q E A A L L F R R - - - - - P
pt013233_POPTR_    E M A A A A Y D V A A L H F R G H D A R V N F P D L V H D L P K P T S S S S E D I R M A A H E A A M S L R P - - - - F T
gm002384_Glyma0    E M A A A A Y D V A A L H L R G R A A R L N F P E L V E T L P R P T S S K P E D V Q V A A Q Q A A V M F R I S P T M S P
pt028408_POPTR_    E M A A A A Y D V A A L H F R G C E A K L N F P E L A G K L P M P A S S S A D H I R M A A H Q A A V S L R P - - - - S T
pt014630_POPTR_    E M A A T A Y D V A A L H F R G Y D A K L N F P D L V H S L P K P A S S D A E D I R I A A H E A A M S L R P - - - - S T
 
AT1G71450.1     E S A M Q V D S S S S S N - - - - - V A P T M V R L S P R E I Q A I N E S T L G S P T T M M H - - - - - - - - - S T Y D
pt011329_POPTR_    V K C S D I V S C G S I T S D G G - F G P V R V G L S P S Q I Q A I N E A P L D S P K M W T E Y L A E S L - - - L T G E
pt013002_POPTR_    M K C S E A V S - G D S S V G G G - L G P V R V G L S P S Q I Q A I N E A P L D S P K M W M E - L A G A L - - - L L E E
pt015543_POPTR_    I K C S E G V S - G S S S G G G G S L G P V R V G L S P S Q I Q A I N E A P L D S P K M W M E - L A G A L - - - L L D E
pt013233_POPTR_    A E S S H G G S - S T S N - - - - - V G P I T V R L S A S Q I Q A I N E S P L D S P K M W M H - M S E I A - - - I L E E
gm002384_Glyma0    I N N H Q G C V - N D N N I I K G S V V P V R V G L S P T Q I Q A I N E S P L D S P K M W M V Q M A E A L R F G F D D H
pt028408_POPTR_    V D S S Q G G S - S S S N - - - - - V G P I T V R L S P S Q I Q A I H E S P L D S P K M W M Q - M A E I A - - - T L E E
pt014630_POPTR_    V E S S Q G G S - S S S N - - - - - V G P I T V R L S P S Q I Q A I N E S P L D S P K M W M Q - M S G I A - - - M P D E
 
AT1G71450.1     P M E F - - - - A N D V E M - - - N A W E T Y - - Q S D F L W D P - - - -
pt011329_POPTR_    P M A M - - - - E N D I G V G Y S - E W E E I - - Q Q E S I W G Y Y - - -
pt013002_POPTR_    P M I M - - - - S D D I D V A Y R D E W G E M - - Q H D S I W D Y - - - -
pt015543_POPTR_    P V A M - - - - G D D I D V E L S D E W G E M E H E H D S I W D Y - - - -
pt013233_POPTR_    - S M V - - - - F S N - N I - E E D E W D N K - - Q T Y S L W D P - - - -
gm002384_Glyma0    S M M M L P S D D D D Y A L E L S - G W E E I - - Q H E S L W D S P E Y M
pt028408_POPTR_    S S M M - - - - F S D - D I - E D D E W D N N - - Q T D S L W G P - - - -
pt014630_POPTR_    - S M I - - - - Y S S I D V G E E E E W D N K - - Q T D S L W D P - - - -
 
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