fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G71450.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt028408 not found in 180aa AT1G71450.1 not_1st 0.510695187 II
Pt014630 not found in 180aa AT1G71450.1 not_1st 0.510695187 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT1G71450.1     MAGLRNSGNSDKAQNDGKGVPSAYRGVRKRKWGKWVSEIREPGTKNRIWLGSFETPEMAA
pt014630_POPTR_ MEE-RN------TASHG-GMSSSYRGVRKRKWGKWVSEIREPGKKSRIWLGSFETPEMAA
pt028408_POPTR_ MEG-RNS-----TAHHG-GIASSYTGVRKRKWGKWVSEIREPEKKTRIWLGSFETPEMAA
                *   **      :  .* *:.*:* ***************** .*.**************

AT1G71450.1     TAYDVAAFHFRGREARLNFPELASSLPRPADSSSDSIRMAVHEATLCRTTEGTESAMQVD
pt014630_POPTR_ TAYDVAALHFRGYDAKLNFPDLVHSLPKPASSDAEDIRIAAHEAAMSLRPSTVESSQ--G
pt028408_POPTR_ AAYDVAALHFRGCEAKLNFPELAGKLPMPASSSADHIRMAAHQAAVSLRPSTVDSSQ--G
                :******:**** :*:****:*. .** **.*.:: **:*.*:*::.  .. .:*:   .

AT1G71450.1     SSSSSNVAPTMVRLSPREIQAINESTLGSPTTMMHST------YDPMEFANDV-EMNAWE
pt014630_POPTR_ GSSSSNVGPITVRLSPSQIQAINESPLDSPKMWMQMSGIAMPDESMIYSSIDVGEEEEWD
pt028408_POPTR_ GSSSSNVGPITVRLSPSQIQAIHESPLDSPKMWMQMAEIATLEESSMMFSDDI-EDDEWD
                .******.*  ***** :****:**.*.**.  *: :       . :  : *: * : *:

AT1G71450.1     TYQSDFLWDP
pt014630_POPTR_ NKQTDSLWDP
pt028408_POPTR_ NNQTDSLWGP
                . *:* **.*
BoxShade v3.31 C (beta, 970507) Output
AT1G71450.1     M A G L R N S G N S D K A Q N D G K G V P S A Y R G V R K R K W G K W V S E I R E P G T K N R I W L G S F E T P E M A A
pt014630_POPTR_    M E E - R N - - - - - - T A S H G - G M S S S Y R G V R K R K W G K W V S E I R E P G K K S R I W L G S F E T P E M A A
pt028408_POPTR_    M E G - R N S - - - - - T A H H G - G I A S S Y T G V R K R K W G K W V S E I R E P E K K T R I W L G S F E T P E M A A
 
AT1G71450.1     T A Y D V A A F H F R G R E A R L N F P E L A S S L P R P A D S S S D S I R M A V H E A T L C R T T E G T E S A M Q V D
pt014630_POPTR_    T A Y D V A A L H F R G Y D A K L N F P D L V H S L P K P A S S D A E D I R I A A H E A A M S L R P S T V E S S Q - - G
pt028408_POPTR_    A A Y D V A A L H F R G C E A K L N F P E L A G K L P M P A S S S A D H I R M A A H Q A A V S L R P S T V D S S Q - - G
 
AT1G71450.1     S S S S S N V A P T M V R L S P R E I Q A I N E S T L G S P T T M M H S T - - - - - - Y D P M E F A N D V - E M N A W E
pt014630_POPTR_    G S S S S N V G P I T V R L S P S Q I Q A I N E S P L D S P K M W M Q M S G I A M P D E S M I Y S S I D V G E E E E W D
pt028408_POPTR_    G S S S S N V G P I T V R L S P S Q I Q A I H E S P L D S P K M W M Q M A E I A T L E E S S M M F S D D I - E D D E W D
 
AT1G71450.1     T Y Q S D F L W D P
pt014630_POPTR_    N K Q T D S L W D P
pt028408_POPTR_    N N Q T D S L W G P
 
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