fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G71450.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt013233 not found in 175aa AT1G71450.1 1st_1st 0.532085561 Ia
Pt028408 not found in 180aa AT1G71450.1 not_1st 0.510695187 II
Pt014630 not found in 180aa AT1G71450.1 not_1st 0.510695187 II
Pt013002 not found in 185aa AT1G33760.1 not_not 0.446524064 III
Pt015543 not found in 188aa AT1G33760.1 not_not 0.427807486 III
Pt011329 not found in 189aa AT1G33760.1 not_not 0.419786096 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT1G71450.1     MAGLRNSGNSDKAQNDGKGVPS-AYRGVRKRKWGKWVSEIREPGTKNRIWLGSFETPEMA
pt013233_POPTR_ MEERNT----------GG-VSS-SYRGVRKRKWGKWVSEIREPGKKNRIWLGSFETPEMA
pt015543_POPTR_ MEGRTRDG-------HPG-ISQPRYRGVRQRKWGKWVSEIREPGKKTRIWLGSYEMPEMA
pt028408_POPTR_ MEGRNSTAH------HGG-IAS-SYTGVRKRKWGKWVSEIREPEKKTRIWLGSFETPEMA
pt011329_POPTR_ MEGRSRDA-------HGDQISTPRYRGIRQRKWGTWVSEIREPGQKTRIWLGSYEKPEMA
pt013002_POPTR_ MEGRIRDG-------HLG-ISPPRYRGVRQRKWGKWVSEIREPGKKTRIWLGSYEIPEMA
pt014630_POPTR_ MEERNTAS-------HGG-MSS-SYRGVRKRKWGKWVSEIREPGKKSRIWLGSFETPEMA
                *                  :.   * *:*:****.********  *.******:* ****

AT1G71450.1     ATAYDVAAFHFRGREARLNFPELASSLPRPADSSSDSIRMAVHEATLCRTTEGTESAMQV
pt013233_POPTR_ AAAYDVAALHFRGHDARVNFPDLVHDLPKPTSSSSEDIRMAAHEAAMSLRPFTAESSHG-
pt015543_POPTR_ AAAYDVAALHLRGRGAQLNFPEMVDSLPRPASSSTEDVQMAAQEAALLFRR-PIKCSEGV
pt028408_POPTR_ AAAYDVAALHFRGCEAKLNFPELAGKLPMPASSSADHIRMAAHQAAVSLRPSTVDSSQG-
pt011329_POPTR_ AVAYDVAALHLRGRGAQLNFPEMEDSLPRPASSRAEDVQAAAREAALLFSTGPVKCSDIV
pt013002_POPTR_ AAAYDVAALHLRGRGAQLNFPEMVDILPQPASSSAEDVQMAAQEAALMFRR-PMKCSEAV
pt014630_POPTR_ ATAYDVAALHFRGYDAKLNFPDLVHSLPKPASSDAEDIRIAAHEAAMSLRPSTVESSQG-
                *.******:*:**  *::***::   ** *:.* :: :: *.::*::       ..:   

AT1G71450.1     D-SSSSSN---VAPTMVRLSPREIQAINESTLGSPTTMMH------STYDPMEFANDVEM
pt013233_POPTR_ --GSSTSN---VGPITVRLSASQIQAINESPLDSPKMWMH-MSEIAILEE-SMVFSN-NI
pt015543_POPTR_ S-GSSSGGGGSLGPVRVGLSPSQIQAINEAPLDSPKMWME-LAGALLLDEPVAMGDDIDV
pt028408_POPTR_ --GSSSSN---VGPITVRLSPSQIQAIHESPLDSPKMWMQ-MAEIATLEESSMMFSD-DI
pt011329_POPTR_ SCGSITSDGG-FGPVRVGLSPSQIQAINEAPLDSPKMWTEYLAESLLTGEPMAMENDIGV
pt013002_POPTR_ S-GDSSVGGG-LGPVRVGLSPSQIQAINEAPLDSPKMWME-LAGALLLEEPMIMSDDIDV
pt014630_POPTR_ --GSSSSN---VGPITVRLSPSQIQAINESPLDSPKMWMQ-MSGIAMPDE-SMIYSSIDV
                  .. : .   ..*  * **. :****:*:.*.**.   .         :   . ..  :

AT1G71450.1     ---NAWETY--QSDFLWDP-
pt013233_POPTR_ -EEDEWDNK--QTYSLWDP-
pt015543_POPTR_ ELSDEWGEMEHEHDSIWDY-
pt028408_POPTR_ -EDDEWDNN--QTDSLWGP-
pt011329_POPTR_ GYS-EWEEI--QQESIWGYY
pt013002_POPTR_ AYRDEWGEM--QHDSIWDY-
pt014630_POPTR_ GEEEEWDNK--QTDSLWDP-
                     *     :   :*.
BoxShade v3.31 C (beta, 970507) Output
AT1G71450.1     M A G L R N S G N S D K A Q N D G K G V P S - A Y R G V R K R K W G K W V S E I R E P G T K N R I W L G S F E T P E M A
pt013233_POPTR_    M E E R N T - - - - - - - - - - G G - V S S - S Y R G V R K R K W G K W V S E I R E P G K K N R I W L G S F E T P E M A
pt015543_POPTR_    M E G R T R D G - - - - - - - H P G - I S Q P R Y R G V R Q R K W G K W V S E I R E P G K K T R I W L G S Y E M P E M A
pt028408_POPTR_    M E G R N S T A H - - - - - - H G G - I A S - S Y T G V R K R K W G K W V S E I R E P E K K T R I W L G S F E T P E M A
pt011329_POPTR_    M E G R S R D A - - - - - - - H G D Q I S T P R Y R G I R Q R K W G T W V S E I R E P G Q K T R I W L G S Y E K P E M A
pt013002_POPTR_    M E G R I R D G - - - - - - - H L G - I S P P R Y R G V R Q R K W G K W V S E I R E P G K K T R I W L G S Y E I P E M A
pt014630_POPTR_    M E E R N T A S - - - - - - - H G G - M S S - S Y R G V R K R K W G K W V S E I R E P G K K S R I W L G S F E T P E M A
 
AT1G71450.1     A T A Y D V A A F H F R G R E A R L N F P E L A S S L P R P A D S S S D S I R M A V H E A T L C R T T E G T E S A M Q V
pt013233_POPTR_    A A A Y D V A A L H F R G H D A R V N F P D L V H D L P K P T S S S S E D I R M A A H E A A M S L R P F T A E S S H G -
pt015543_POPTR_    A A A Y D V A A L H L R G R G A Q L N F P E M V D S L P R P A S S S T E D V Q M A A Q E A A L L F R R - P I K C S E G V
pt028408_POPTR_    A A A Y D V A A L H F R G C E A K L N F P E L A G K L P M P A S S S A D H I R M A A H Q A A V S L R P S T V D S S Q G -
pt011329_POPTR_    A V A Y D V A A L H L R G R G A Q L N F P E M E D S L P R P A S S R A E D V Q A A A R E A A L L F S T G P V K C S D I V
pt013002_POPTR_    A A A Y D V A A L H L R G R G A Q L N F P E M V D I L P Q P A S S S A E D V Q M A A Q E A A L M F R R - P M K C S E A V
pt014630_POPTR_    A T A Y D V A A L H F R G Y D A K L N F P D L V H S L P K P A S S D A E D I R I A A H E A A M S L R P S T V E S S Q G -
 
AT1G71450.1     D - S S S S S N - - - V A P T M V R L S P R E I Q A I N E S T L G S P T T M M H - - - - - - S T Y D P M E F A N D V E M
pt013233_POPTR_    - - G S S T S N - - - V G P I T V R L S A S Q I Q A I N E S P L D S P K M W M H - M S E I A I L E E - S M V F S N - N I
pt015543_POPTR_    S - G S S S G G G G S L G P V R V G L S P S Q I Q A I N E A P L D S P K M W M E - L A G A L L L D E P V A M G D D I D V
pt028408_POPTR_    - - G S S S S N - - - V G P I T V R L S P S Q I Q A I H E S P L D S P K M W M Q - M A E I A T L E E S S M M F S D - D I
pt011329_POPTR_    S C G S I T S D G G - F G P V R V G L S P S Q I Q A I N E A P L D S P K M W T E Y L A E S L L T G E P M A M E N D I G V
pt013002_POPTR_    S - G D S S V G G G - L G P V R V G L S P S Q I Q A I N E A P L D S P K M W M E - L A G A L L L E E P M I M S D D I D V
pt014630_POPTR_    - - G S S S S N - - - V G P I T V R L S P S Q I Q A I N E S P L D S P K M W M Q - M S G I A M P D E - S M I Y S S I D V
 
AT1G71450.1     - - - N A W E T Y - - Q S D F L W D P -
pt013233_POPTR_    - E E D E W D N K - - Q T Y S L W D P -
pt015543_POPTR_    E L S D E W G E M E H E H D S I W D Y -
pt028408_POPTR_    - E D D E W D N N - - Q T D S L W G P -
pt011329_POPTR_    G Y S - E W E E I - - Q Q E S I W G Y Y
pt013002_POPTR_    A Y R D E W G E M - - Q H D S I W D Y -
pt014630_POPTR_    G E E E E W D N K - - Q T D S L W D P -
 
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