fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G71450.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm002384 not found in 213aa AT1G33760.1 1st_not 0.430481283 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G71450.1     ---MAGLRNSGNSDKAQNDGKGVP------SAYRGVRKRKWGKWVSEIREPGTKNRIWLG
gm002384_Glyma0 MDQETTRRNT-----MQECHVIAPTTTTATSSYRGVRQRKWGKWVSEIREPGKKSRIWLG
                    :  **:      *:    .*      *:*****:**************.*.*****

AT1G71450.1     SFETPEMAATAYDVAAFHFRGREARLNFPELASSLPRPADSSSDSIRMAVHEATLCRTTE
gm002384_Glyma0 SYESPEMAAAAYDVAALHLRGRAARLNFPELVETLPRPTSSKPEDVQVAAQQAAVMFRIS
                *:*:*****:******:*:*** ********..:****:.*..:.:::*.::*::    .

AT1G71450.1     GTESAMQ-----VDSSS--SSNVAPTMVRLSPREIQAINESTLGSPTTMMHSTYDPMEFA
gm002384_Glyma0 PTMSPINNHQGCVNDNNIIKGSVVPVRVGLSPTQIQAINESPLDSPKMWMVQMAEALRFG
                 * *.::     *:...  ...*.*. * *** :*******.*.**.  * .  :.:.*.

AT1G71450.1     ND---------------VEMNAWETYQSDFLWDP----
gm002384_Glyma0 FDDHSMMMLPSDDDDYALELSGWEEIQHESLWDSPEYM
                 *               :*:..**  * : ***.
BoxShade v3.31 C (beta, 970507) Output
AT1G71450.1     - - - M A G L R N S G N S D K A Q N D G K G V P - - - - - - S A Y R G V R K R K W G K W V S E I R E P G T K N R I W L G
gm002384_Glyma0    M D Q E T T R R N T - - - - - M Q E C H V I A P T T T T A T S S Y R G V R Q R K W G K W V S E I R E P G K K S R I W L G
 
AT1G71450.1     S F E T P E M A A T A Y D V A A F H F R G R E A R L N F P E L A S S L P R P A D S S S D S I R M A V H E A T L C R T T E
gm002384_Glyma0    S Y E S P E M A A A A Y D V A A L H L R G R A A R L N F P E L V E T L P R P T S S K P E D V Q V A A Q Q A A V M F R I S
 
AT1G71450.1     G T E S A M Q - - - - - V D S S S - - S S N V A P T M V R L S P R E I Q A I N E S T L G S P T T M M H S T Y D P M E F A
gm002384_Glyma0    P T M S P I N N H Q G C V N D N N I I K G S V V P V R V G L S P T Q I Q A I N E S P L D S P K M W M V Q M A E A L R F G
 
AT1G71450.1     N D - - - - - - - - - - - - - - - V E M N A W E T Y Q S D F L W D P - - - -
gm002384_Glyma0    F D D H S M M M L P S D D D D Y A L E L S G W E E I Q H E S L W D S P E Y M
 
0