fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G71520.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm029484 not found in 179aa AT1G71520.1 not_1st 0.439862542 II
Pt013342 not found in 185aa AT1G22810.1 1st_not 0.474226804 II
Pt015463 not found in 168aa AT1G71520.1 not_1st 0.467353951 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT1G71520.1     ---------------MDSRDTGETDQSKYKGIRRRKWGKWVSEIRVPGTRQRLWLGSFST
pt015463_POPTR_ MSG------SSSSR-TDQESGASAARKKFKGVRRRKWGKWVSEIRIPGKQDRLWLGSYST
gm029484_Glyma1 -----------MSR-SSAMHGITSTNNKLKGVRRRKWGKWVSEIRVPGTQERLWLGTYAT
pt013342_POPTR_ MSGSSGGSSSSSSRIIDQESGASESQRKFKGARRRKWGKWVSEIRIPGKQERLWLGSYST
                                .        . * ** *************:**.::*****:::*

AT1G71520.1     AEGAAVAHDVAFYCLHRPSSLDDESFNFPHLLTT-SLA-SNISPKSIQKAASDAGMAVDA
pt015463_POPTR_ PEAAAVAHDIASYCLRGPSSI--ESLNFPLMLPA-SVR-EDMSPKSIQKAASDAGMAIDA
gm029484_Glyma1 PEAAAVAHDVAVYCLSRPSSL--DKLNFPETLSSYSVQLRDMSPRSVQKVASDVGMDVDA
pt013342_POPTR_ PEAAAVAHDIASYCLRGPSSL--ESLNFPLMLPA-SVR-EDMSPKSIQKAASDAGMAIDA
                .*.******:* ***  ***:  :.:***  *.: *:   ::**:*:**.***.** :**

AT1G71520.1     GF------------------------------------HG--------AVSGSGG----C
pt015463_POPTR_ QMIL----------------NRVPENEVKFWTASGGVNHGLEIELCEPAGGDHGG-----
gm029484_Glyma1 RNIVAGKTSTVGAETNCESDERTSTASVCNVVGEGGADHS-DVFWWD----DDGG-----
pt013342_POPTR_ QMIL----------------NRSLQNEVKVGPENVAINHGPQTQLWEPAAGGGGDSSNRC
                                                      *.           . *.     

AT1G71520.1     -EERSSMANMEEEDKLSISVYDYLEDDLV
pt015463_POPTR_ -NWHGNNTGMREGD---ISIEDYL-----
gm029484_Glyma1 -SWHGSGGDSTERDALSISIEDYL-----
pt013342_POPTR_ ENWHENNIGTRVGDDLNISIEDYLM----
                 . : .  .    *   **: ***
BoxShade v3.31 C (beta, 970507) Output
AT1G71520.1     - - - - - - - - - - - - - - - M D S R D T G E T D Q S K Y K G I R R R K W G K W V S E I R V P G T R Q R L W L G S F S T
pt015463_POPTR_    M S G - - - - - - S S S S R - T D Q E S G A S A A R K K F K G V R R R K W G K W V S E I R I P G K Q D R L W L G S Y S T
gm029484_Glyma1    - - - - - - - - - - - M S R - S S A M H G I T S T N N K L K G V R R R K W G K W V S E I R V P G T Q E R L W L G T Y A T
pt013342_POPTR_    M S G S S G G S S S S S S R I I D Q E S G A S E S Q R K F K G A R R R K W G K W V S E I R I P G K Q E R L W L G S Y S T
 
AT1G71520.1     A E G A A V A H D V A F Y C L H R P S S L D D E S F N F P H L L T T - S L A - S N I S P K S I Q K A A S D A G M A V D A
pt015463_POPTR_    P E A A A V A H D I A S Y C L R G P S S I - - E S L N F P L M L P A - S V R - E D M S P K S I Q K A A S D A G M A I D A
gm029484_Glyma1    P E A A A V A H D V A V Y C L S R P S S L - - D K L N F P E T L S S Y S V Q L R D M S P R S V Q K V A S D V G M D V D A
pt013342_POPTR_    P E A A A V A H D I A S Y C L R G P S S L - - E S L N F P L M L P A - S V R - E D M S P K S I Q K A A S D A G M A I D A
 
AT1G71520.1     G F - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - H G - - - - - - - - A V S G S G G - - - - C
pt015463_POPTR_    Q M I L - - - - - - - - - - - - - - - - N R V P E N E V K F W T A S G G V N H G L E I E L C E P A G G D H G G - - - - -
gm029484_Glyma1    R N I V A G K T S T V G A E T N C E S D E R T S T A S V C N V V G E G G A D H S - D V F W W D - - - - D D G G - - - - -
pt013342_POPTR_    Q M I L - - - - - - - - - - - - - - - - N R S L Q N E V K V G P E N V A I N H G P Q T Q L W E P A A G G G G D S S N R C
 
AT1G71520.1     - E E R S S M A N M E E E D K L S I S V Y D Y L E D D L V
pt015463_POPTR_    - N W H G N N T G M R E G D - - - I S I E D Y L - - - - -
gm029484_Glyma1    - S W H G S G G D S T E R D A L S I S I E D Y L - - - - -
pt013342_POPTR_    E N W H E N N I G T R V G D D L N I S I E D Y L M - - - -
 
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