fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G71520.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm029484 not found in 179aa AT1G71520.1 not_1st 0.439862542 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G71520.1     MDSRDTG----ETDQSKYKGIRRRKWGKWVSEIRVPGTRQRLWLGSFSTAEGAAVAHDVA
gm029484_Glyma1 -MSRSSAMHGITSTNNKLKGVRRRKWGKWVSEIRVPGTQERLWLGTYATPEAAAVAHDVA
                  **.:.     : :.* **:*****************::*****:::*.*.********

AT1G71520.1     FYCLHRPSSLDDESFNFPHLLTTSLAS--NISPKSIQKAASDAGMAVD-----AGFHGAV
gm029484_Glyma1 VYCLSRPSSLD--KLNFPETLSSYSVQLRDMSPRSVQKVASDVGMDVDARNIVAGKTSTV
                .*** ******  .:***. *::  ..  ::**:*:**.***.** **     **  .:*

AT1G71520.1     SGSGGCE--ERSSMANM-------------------------------EEEDKLSISVYD
gm029484_Glyma1 GAETNCESDERTSTASVCNVVGEGGADHSDVFWWDDDGGSWHGSGGDSTERDALSISIED
                ... .**  **:* *.:                                *.* ****: *

AT1G71520.1     YLEDDLV
gm029484_Glyma1 YL-----
                **
BoxShade v3.31 C (beta, 970507) Output
AT1G71520.1     M D S R D T G - - - - E T D Q S K Y K G I R R R K W G K W V S E I R V P G T R Q R L W L G S F S T A E G A A V A H D V A
gm029484_Glyma1    - M S R S S A M H G I T S T N N K L K G V R R R K W G K W V S E I R V P G T Q E R L W L G T Y A T P E A A A V A H D V A
 
AT1G71520.1     F Y C L H R P S S L D D E S F N F P H L L T T S L A S - - N I S P K S I Q K A A S D A G M A V D - - - - - A G F H G A V
gm029484_Glyma1    V Y C L S R P S S L D - - K L N F P E T L S S Y S V Q L R D M S P R S V Q K V A S D V G M D V D A R N I V A G K T S T V
 
AT1G71520.1     S G S G G C E - - E R S S M A N M - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - E E E D K L S I S V Y D
gm029484_Glyma1    G A E T N C E S D E R T S T A S V C N V V G E G G A D H S D V F W W D D D G G S W H G S G G D S T E R D A L S I S I E D
 
AT1G71520.1     Y L E D D L V
gm029484_Glyma1    Y L - - - - -
 
0