fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G71930.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm055013 not found in 359aa AT1G71930.1 not_1st 0.462639109 II
Pt013956 not found in 307aa AT1G71930.1 not_1st 0.480127186 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT1G71930.1     ---------MDNI-MQSSMPPGFRFHPTEEELVGYYLDRKINSMKSALDVIVEIDLYKME
gm055013_Glyma2 MTLAPIPERSSSIDMESCVPPGFRFHPTEEELVGYYLKRKINSLKIDLDVIVEIDLYKME
pt013956_POPTR_ --------------MESCVPPGFRFHPTEEELVGYYLKRKIDSQKIDLDVIANIDLYKME
                              *:*.:******************.***:* *  ****.:*******

AT1G71930.1     PWDIQARCKLGYEEQNEWYFFSHKDRKYPTGTRTNRATAAGFWKATGRDKAVLSKNSVIG
gm055013_Glyma2 PWDIQDRCKLGYEQQNEWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKAVMSKNRIIG
pt013956_POPTR_ PWDIQARCNLGYAEQNEWYFFSHKDRKYPTGTRTNRATAAGFWKATGRDKAVLSKNRLIG
                ***** **:*** :***********:**************************:*** :**

AT1G71930.1     MRKTLVYYKGRAPNGRKSDWIMHEYRLQNSELAPV------------------QEEGWVV
gm055013_Glyma2 MRKTLVFYKGRAPNGRKTDWIMHEYRHQTSEHGPPQYHEKLKVAEVGSKLFLLQEEGWVV
pt013956_POPTR_ MRKTLVFYKGRAPNGRKTDWIMHEYRLQTSEHGPP------------------QEEGWVV
                ******:**********:******** *.** .*                   *******

AT1G71930.1     CRAFRKPIPNQRPLGYEPW-----QNQLYHVESSNNY----SSSVTMNTSHHIGASSSSH
gm055013_Glyma2 CRAFRKPSPSHRQ-GFDPWCSTSSQQQHFFRDQIQSYARPLSIADILNETNNVPHPVEGT
pt013956_POPTR_ CRAFKKPSPNQRQ-GFEAW------SHAYYLNDI-NHARPPSFSDTVTTAHNMVRPNQGA
                ****:** *.:*  *::.*      .: :. :.  .:    * :  :. ::::  . .. 

AT1G71930.1     NLNQMLMSNNHYNPNNTSSSMHQYGN----IELPQLDSPS-LSPSLGT---NKDQ-----
gm055013_Glyma2 SFSHSFNSDNQQHLNNIISNQTAIIMDKQLLELPQLDSP---TASLAIKECNQQQHNGLT
pt013956_POPTR_ SFQQPFGSN-----SDLVSNQTFLDNNNQLVELPELDSPSTLSTSFAAKEGNFHQ----T
                .:.: : *:     .:  *.          :***:****   :.*:.    * .*     

AT1G71930.1     NESF--EQEEEKSFNCVDWRTLDTLLETQVI-------HPHNPNILMFETQSYNPAPSFP
gm055013_Glyma2 NEEYCSDERSNSSAQGIDWKSFDNLFGSQLSDNAAYFSHPNLPLVM--------------
pt013956_POPTR_ NEDY-DEERSNNSSQYIDWKNFDTLLASQRD-------------VV--------------
                **.:  ::..:.* : :**:.:*.*: :*               ::              

AT1G71930.1     SMHQSYNEVEANIHHSLGCFPDS--------
gm055013_Glyma2 ----PHNHDQAS--HILGCFPDS--------
pt013956_POPTR_ ----EHQLLLQN--HV-ATLPSASSVPVESF
                     ::    .  *  . :*.:
BoxShade v3.31 C (beta, 970507) Output
AT1G71930.1     - - - - - - - - - M D N I - M Q S S M P P G F R F H P T E E E L V G Y Y L D R K I N S M K S A L D V I V E I D L Y K M E
gm055013_Glyma2    M T L A P I P E R S S S I D M E S C V P P G F R F H P T E E E L V G Y Y L K R K I N S L K I D L D V I V E I D L Y K M E
pt013956_POPTR_    - - - - - - - - - - - - - - M E S C V P P G F R F H P T E E E L V G Y Y L K R K I D S Q K I D L D V I A N I D L Y K M E
 
AT1G71930.1     P W D I Q A R C K L G Y E E Q N E W Y F F S H K D R K Y P T G T R T N R A T A A G F W K A T G R D K A V L S K N S V I G
gm055013_Glyma2    P W D I Q D R C K L G Y E Q Q N E W Y F F S H K D K K Y P T G T R T N R A T A A G F W K A T G R D K A V M S K N R I I G
pt013956_POPTR_    P W D I Q A R C N L G Y A E Q N E W Y F F S H K D R K Y P T G T R T N R A T A A G F W K A T G R D K A V L S K N R L I G
 
AT1G71930.1     M R K T L V Y Y K G R A P N G R K S D W I M H E Y R L Q N S E L A P V - - - - - - - - - - - - - - - - - - Q E E G W V V
gm055013_Glyma2    M R K T L V F Y K G R A P N G R K T D W I M H E Y R H Q T S E H G P P Q Y H E K L K V A E V G S K L F L L Q E E G W V V
pt013956_POPTR_    M R K T L V F Y K G R A P N G R K T D W I M H E Y R L Q T S E H G P P - - - - - - - - - - - - - - - - - - Q E E G W V V
 
AT1G71930.1     C R A F R K P I P N Q R P L G Y E P W - - - - - Q N Q L Y H V E S S N N Y - - - - S S S V T M N T S H H I G A S S S S H
gm055013_Glyma2    C R A F R K P S P S H R Q - G F D P W C S T S S Q Q Q H F F R D Q I Q S Y A R P L S I A D I L N E T N N V P H P V E G T
pt013956_POPTR_    C R A F K K P S P N Q R Q - G F E A W - - - - - - S H A Y Y L N D I - N H A R P P S F S D T V T T A H N M V R P N Q G A
 
AT1G71930.1     N L N Q M L M S N N H Y N P N N T S S S M H Q Y G N - - - - I E L P Q L D S P S - L S P S L G T - - - N K D Q - - - - -
gm055013_Glyma2    S F S H S F N S D N Q Q H L N N I I S N Q T A I I M D K Q L L E L P Q L D S P - - - T A S L A I K E C N Q Q Q H N G L T
pt013956_POPTR_    S F Q Q P F G S N - - - - - S D L V S N Q T F L D N N N Q L V E L P E L D S P S T L S T S F A A K E G N F H Q - - - - T
 
AT1G71930.1     N E S F - - E Q E E E K S F N C V D W R T L D T L L E T Q V I - - - - - - - H P H N P N I L M F E T Q S Y N P A P S F P
gm055013_Glyma2    N E E Y C S D E R S N S S A Q G I D W K S F D N L F G S Q L S D N A A Y F S H P N L P L V M - - - - - - - - - - - - - -
pt013956_POPTR_    N E D Y - D E E R S N N S S Q Y I D W K N F D T L L A S Q R D - - - - - - - - - - - - - V V - - - - - - - - - - - - - -
 
AT1G71930.1     S M H Q S Y N E V E A N I H H S L G C F P D S - - - - - - - -
gm055013_Glyma2    - - - - P H N H D Q A S - - H I L G C F P D S - - - - - - - -
pt013956_POPTR_    - - - - E H Q L L L Q N - - H V - A T L P S A S S V P V E S F
 
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