fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G71930.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm030146 not found in 344aa AT2G18060.1 not_not 0.410174880 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G71930.1     MDNIMQSSMPPGFRFHPTEEELVGYYLDRKINSMKSALDVIVEIDLYKMEPWDIQARCKL
gm030146_Glyma1 MES-MESCVPPGFRFHPTDEELVGYYLRKKVASQKIDLDVIREIDLYRIEPWDLQERCRI
                *:. *:*.:*********:******** :*: * *  **** *****::****:* **::

AT1G71930.1     GYEEQNEWYFFSHKDRKYPTGTRTNRATAAGFWKATGRDKAVLSKNSVIGMRKTLVYYKG
gm030146_Glyma1 GYEEQNEWYFFSHKDKKYPTGTRTNRATMAGFWKATGRDKAVYERAKLIGMRKTLVFYKG
                ***************:************ ************* .: .:********:***

AT1G71930.1     RAPNGRKSDWIMHEYRLQNSELAPVQEEGWVVCRAFRKPIPNQ-RPLGYEPWQNQLYHVE
gm030146_Glyma1 RAPNGQKSDWIMHEYRLESDENGPPQEEGWVVCRAFKKKTTGQTKTINIEGWESSYFYDE
                *****:***********:..* .* ***********:*  ..* :.:. * *:.. :: *

AT1G71930.1     SSNNYSSSVTMNTSHHIGASSSSHNLNQMLMSNNHYNPNNTSSSMHQYGNIELPQLDSPS
gm030146_Glyma1 ASG--ATSTLVDPIELISRQSQSF-LAQNFMCKQELEADNL-TCMHQDPFVQLPQLESPS
                :*.  ::*. ::. . *. .*.*. * * :*.::. :.:*  :.***   ::****:***

AT1G71930.1     L----SPSLGT--NKDQNESFEQEEEKSFN-------CVDWRTLDTLLETQV---IHPHN
gm030146_Glyma1 LPLVKKPSTVSLVSDNNNEGEDNQNRLLFNNNNTKKVTTDWRALDKFVASQLSQEVNTHE
                *    .**  :  ..::**. ::::.  **        .***:**.:: :*:   ::.*:

AT1G71930.1     PNILMFETQSYNPAPS--------FPSMHQSYNEVEANIHHSLGCFPDS---
gm030146_Glyma1 TNVGVL-SSSFEPHDDNHDMALLLLQSSRDEGNRLSPFLNTSSDC--DNGIC
                .*: :: :.*::*  .        : * ::. *.:.. :: * .*  *.
BoxShade v3.31 C (beta, 970507) Output
AT1G71930.1     M D N I M Q S S M P P G F R F H P T E E E L V G Y Y L D R K I N S M K S A L D V I V E I D L Y K M E P W D I Q A R C K L
gm030146_Glyma1    M E S - M E S C V P P G F R F H P T D E E L V G Y Y L R K K V A S Q K I D L D V I R E I D L Y R I E P W D L Q E R C R I
 
AT1G71930.1     G Y E E Q N E W Y F F S H K D R K Y P T G T R T N R A T A A G F W K A T G R D K A V L S K N S V I G M R K T L V Y Y K G
gm030146_Glyma1    G Y E E Q N E W Y F F S H K D K K Y P T G T R T N R A T M A G F W K A T G R D K A V Y E R A K L I G M R K T L V F Y K G
 
AT1G71930.1     R A P N G R K S D W I M H E Y R L Q N S E L A P V Q E E G W V V C R A F R K P I P N Q - R P L G Y E P W Q N Q L Y H V E
gm030146_Glyma1    R A P N G Q K S D W I M H E Y R L E S D E N G P P Q E E G W V V C R A F K K K T T G Q T K T I N I E G W E S S Y F Y D E
 
AT1G71930.1     S S N N Y S S S V T M N T S H H I G A S S S S H N L N Q M L M S N N H Y N P N N T S S S M H Q Y G N I E L P Q L D S P S
gm030146_Glyma1    A S G - - A T S T L V D P I E L I S R Q S Q S F - L A Q N F M C K Q E L E A D N L - T C M H Q D P F V Q L P Q L E S P S
 
AT1G71930.1     L - - - - S P S L G T - - N K D Q N E S F E Q E E E K S F N - - - - - - - C V D W R T L D T L L E T Q V - - - I H P H N
gm030146_Glyma1    L P L V K K P S T V S L V S D N N N E G E D N Q N R L L F N N N N T K K V T T D W R A L D K F V A S Q L S Q E V N T H E
 
AT1G71930.1     P N I L M F E T Q S Y N P A P S - - - - - - - - F P S M H Q S Y N E V E A N I H H S L G C F P D S - - -
gm030146_Glyma1    T N V G V L - S S S F E P H D D N H D M A L L L L Q S S R D E G N R L S P F L N T S S D C - - D N G I C
 
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