fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G71930.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm028436 not found in 346aa AT1G71930.1 1st_1st 0.472178060 Ia
Pt015103 not found in 319aa AT1G71930.1 1st_1st 0.508744038 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT1G71930.1     --MDNI--------MQSSMPPGFRFHPTEEELVGYYLDRKINSMKSALDVIVEIDLYKME
gm028436_Glyma1 MSLTQIPERSSSIDMESCVPPGFRFHPTEDELVGYYLKRKINSLKIDLDVIVEIDLYKME
pt015103_POPTR_ --------------MESCVPPGFRFHPTEEELVGYYLKRKIHSLKIDLDVIVDIDLYNME
                              *:*.:**********:*******.***:*:*  *****:****:**

AT1G71930.1     PWDIQARCKLGYEEQNEWYFFSHKDRKYPTGTRTNRATAAGFWKATGRDKAVLSKNSVIG
gm028436_Glyma1 PWDIQDRCKLGYEQQNEWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKAVMSKNRIIG
pt015103_POPTR_ PWDIQAKCKLGYDEQNEWYFFSHKDRKYPTGTRTNRATAAGFWKATGRDKAVLTKNRLIG
                ***** :*****::***********:**************************::** :**

AT1G71930.1     MRKTLVYYKGRAPNGRKSDWIMHEYRLQNSELAPVQEEGWVVCRAFRKPIPNQRPLGYE-
gm028436_Glyma1 MRKTLVFYKGRAPNGRKTDWIMHEYRHQTSEHGPPQEEGWVVCRAFRKPSPSHRP-GFDH
pt015103_POPTR_ MRKTLVFYKGRAPNGRKTDWIMHEYRLQTSEHGPQQAKGWVVCRAFKKPIPNQRQ-GFE-
                ******:**********:******** *.** .* * :********:** *.:*  *:: 

AT1G71930.1     PW-----QNQLYHVESSNNYSS-----SVTMNTSHHI-----GASSSSHNLNQ--MLMSN
gm028436_Glyma1 PWCSTSSQQQHFFRDQIQSYSSRPLSIADILDETNNVPHPNAEGTSFSHPFSS-----DH
pt015103_POPTR_ AW------NHAYYVNNIN--HARPPSFSDTVTTTHTV-HPN-QSASFHQPFSSSSDLISH
                .*      :: :. :. :   :     :  :  :: :      .:*  : :..     .:

AT1G71930.1     NHYNPN---NTSSSMHQYGNIELPQLDSPS-LSPSLGT---NKDQ-----NESFEQEEEK
gm028436_Glyma1 QQHLNNLLSNQTVAIMDKQLIELPQLDSP---TASLAIKECNQQQHNGLTNEEY-CSDER
pt015103_POPTR_ QEFLDN----------NNRLVELPQLDSPSTLSTSFAPKEGNFHQ----TNEDY--DDER
                :..  *          :   :********   :.*:.    * .*     **.:  .:*:

AT1G71930.1     SFNC----VDWRTLDTLLETQVIHPHNPNILMFETQSYNPAPSFPSMHQSYNE---VEAN
gm028436_Glyma1 SNNSNAQGIDWKSLDNLFGSQLSD---------NA-AYFSHPNLPLMMPH------NHDQ
pt015103_POPTR_ SNNS-SQYIDWKSLDTLLASQVND---------SSTSSFPLQNFPSITQNYDLAAGQQDH
                * *.    :**::**.*: :*: .         .: :  .  .:* :          . :

AT1G71930.1     IHHSLGCFPDS-
gm028436_Glyma1 ASHILGCFPDSS
pt015103_POPTR_ VSHFLDCFPDI-
                  * *.****
BoxShade v3.31 C (beta, 970507) Output
AT1G71930.1     - - M D N I - - - - - - - - M Q S S M P P G F R F H P T E E E L V G Y Y L D R K I N S M K S A L D V I V E I D L Y K M E
gm028436_Glyma1    M S L T Q I P E R S S S I D M E S C V P P G F R F H P T E D E L V G Y Y L K R K I N S L K I D L D V I V E I D L Y K M E
pt015103_POPTR_    - - - - - - - - - - - - - - M E S C V P P G F R F H P T E E E L V G Y Y L K R K I H S L K I D L D V I V D I D L Y N M E
 
AT1G71930.1     P W D I Q A R C K L G Y E E Q N E W Y F F S H K D R K Y P T G T R T N R A T A A G F W K A T G R D K A V L S K N S V I G
gm028436_Glyma1    P W D I Q D R C K L G Y E Q Q N E W Y F F S H K D K K Y P T G T R T N R A T A A G F W K A T G R D K A V M S K N R I I G
pt015103_POPTR_    P W D I Q A K C K L G Y D E Q N E W Y F F S H K D R K Y P T G T R T N R A T A A G F W K A T G R D K A V L T K N R L I G
 
AT1G71930.1     M R K T L V Y Y K G R A P N G R K S D W I M H E Y R L Q N S E L A P V Q E E G W V V C R A F R K P I P N Q R P L G Y E -
gm028436_Glyma1    M R K T L V F Y K G R A P N G R K T D W I M H E Y R H Q T S E H G P P Q E E G W V V C R A F R K P S P S H R P - G F D H
pt015103_POPTR_    M R K T L V F Y K G R A P N G R K T D W I M H E Y R L Q T S E H G P Q Q A K G W V V C R A F K K P I P N Q R Q - G F E -
 
AT1G71930.1     P W - - - - - Q N Q L Y H V E S S N N Y S S - - - - - S V T M N T S H H I - - - - - G A S S S S H N L N Q - - M L M S N
gm028436_Glyma1    P W C S T S S Q Q Q H F F R D Q I Q S Y S S R P L S I A D I L D E T N N V P H P N A E G T S F S H P F S S - - - - - D H
pt015103_POPTR_    A W - - - - - - N H A Y Y V N N I N - - H A R P P S F S D T V T T T H T V - H P N - Q S A S F H Q P F S S S S D L I S H
 
AT1G71930.1     N H Y N P N - - - N T S S S M H Q Y G N I E L P Q L D S P S - L S P S L G T - - - N K D Q - - - - - N E S F E Q E E E K
gm028436_Glyma1    Q Q H L N N L L S N Q T V A I M D K Q L I E L P Q L D S P - - - T A S L A I K E C N Q Q Q H N G L T N E E Y - C S D E R
pt015103_POPTR_    Q E F L D N - - - - - - - - - - N N R L V E L P Q L D S P S T L S T S F A P K E G N F H Q - - - - T N E D Y - - D D E R
 
AT1G71930.1     S F N C - - - - V D W R T L D T L L E T Q V I H P H N P N I L M F E T Q S Y N P A P S F P S M H Q S Y N E - - - V E A N
gm028436_Glyma1    S N N S N A Q G I D W K S L D N L F G S Q L S D - - - - - - - - - N A - A Y F S H P N L P L M M P H - - - - - - N H D Q
pt015103_POPTR_    S N N S - S Q Y I D W K S L D T L L A S Q V N D - - - - - - - - - S S T S S F P L Q N F P S I T Q N Y D L A A G Q Q D H
 
AT1G71930.1     I H H S L G C F P D S -
gm028436_Glyma1    A S H I L G C F P D S S
pt015103_POPTR_    V S H F L D C F P D I -
 
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