fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G71930.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt015103 not found in 319aa AT1G71930.1 1st_1st 0.508744038 Ia
Pt013956 not found in 307aa AT1G71930.1 not_1st 0.480127186 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT1G71930.1     MDNIMQSSMPPGFRFHPTEEELVGYYLDRKINSMKSALDVIVEIDLYKMEPWDIQARCKL
pt013956_POPTR_ ----MESCVPPGFRFHPTEEELVGYYLKRKIDSQKIDLDVIANIDLYKMEPWDIQARCNL
pt015103_POPTR_ ----MESCVPPGFRFHPTEEELVGYYLKRKIHSLKIDLDVIVDIDLYNMEPWDIQAKCKL
                    *:*.:******************.***.* *  ****.:****:********:*:*

AT1G71930.1     GYEEQNEWYFFSHKDRKYPTGTRTNRATAAGFWKATGRDKAVLSKNSVIGMRKTLVYYKG
pt013956_POPTR_ GYAEQNEWYFFSHKDRKYPTGTRTNRATAAGFWKATGRDKAVLSKNRLIGMRKTLVFYKG
pt015103_POPTR_ GYDEQNEWYFFSHKDRKYPTGTRTNRATAAGFWKATGRDKAVLTKNRLIGMRKTLVFYKG
                ** ****************************************:** :********:***

AT1G71930.1     RAPNGRKSDWIMHEYRLQNSELAPVQEEGWVVCRAFRKPIPNQRPLGYEPWQNQLYHVES
pt013956_POPTR_ RAPNGRKTDWIMHEYRLQTSEHGPPQEEGWVVCRAFKKPSPNQRQ-GFEAW-SHAYYLND
pt015103_POPTR_ RAPNGRKTDWIMHEYRLQTSEHGPQQAKGWVVCRAFKKPIPNQRQ-GFEAW-NHAYYVNN
                *******:**********.** .* * :********:** ****  *:*.* .: *:::.

AT1G71930.1     SNNY---SSSVTMNTSHHIGASSSSHNLNQM------LMSNNHYNPNNTSSSMHQYGNIE
pt013956_POPTR_ INHARPPSFSDTVTTAHNMVRPNQGASFQQPFGSNSDLVSNQTFLDNNNQL-------VE
pt015103_POPTR_ INHARPPSFSDTVTTTHT-VHPNQSASFHQPFSSSSDLISHQEFLDNNNRL-------VE
                 *:    * * *:.*:*    .... .::*       *:*:: :  **.         :*

AT1G71930.1     LPQLDSP-----SLSPSLGTNKDQNESFEQEEEKSFNC---VDWRTLDTLLETQ------
pt013956_POPTR_ LPELDSPSTLSTSFAAKEGNFHQTNEDY--DEERSNNSSQYIDWKNFDTLLASQRDVVEH
pt015103_POPTR_ LPQLDSPSTLSTSFAPKEGNFHQTNEDY--DDERSNNSSQYIDWKSLDTLLASQ------
                **:****     *::.. *. :: **.:  ::*:* *.   :**:.:**** :*      

AT1G71930.1     --VIHPHNPNILMFETQSYNPAPSFPSMHQSYNEV---EANIHHSLGCFPDS
pt013956_POPTR_ QLLLQNH---VATLPSASSVPVESF---------------------------
pt015103_POPTR_ -----------VNDSSTSSFPLQNFPSITQNYDLAAGQQDHVSHFLDCFPDI
                               : *  *  .*
BoxShade v3.31 C (beta, 970507) Output
AT1G71930.1     M D N I M Q S S M P P G F R F H P T E E E L V G Y Y L D R K I N S M K S A L D V I V E I D L Y K M E P W D I Q A R C K L
pt013956_POPTR_    - - - - M E S C V P P G F R F H P T E E E L V G Y Y L K R K I D S Q K I D L D V I A N I D L Y K M E P W D I Q A R C N L
pt015103_POPTR_    - - - - M E S C V P P G F R F H P T E E E L V G Y Y L K R K I H S L K I D L D V I V D I D L Y N M E P W D I Q A K C K L
 
AT1G71930.1     G Y E E Q N E W Y F F S H K D R K Y P T G T R T N R A T A A G F W K A T G R D K A V L S K N S V I G M R K T L V Y Y K G
pt013956_POPTR_    G Y A E Q N E W Y F F S H K D R K Y P T G T R T N R A T A A G F W K A T G R D K A V L S K N R L I G M R K T L V F Y K G
pt015103_POPTR_    G Y D E Q N E W Y F F S H K D R K Y P T G T R T N R A T A A G F W K A T G R D K A V L T K N R L I G M R K T L V F Y K G
 
AT1G71930.1     R A P N G R K S D W I M H E Y R L Q N S E L A P V Q E E G W V V C R A F R K P I P N Q R P L G Y E P W Q N Q L Y H V E S
pt013956_POPTR_    R A P N G R K T D W I M H E Y R L Q T S E H G P P Q E E G W V V C R A F K K P S P N Q R Q - G F E A W - S H A Y Y L N D
pt015103_POPTR_    R A P N G R K T D W I M H E Y R L Q T S E H G P Q Q A K G W V V C R A F K K P I P N Q R Q - G F E A W - N H A Y Y V N N
 
AT1G71930.1     S N N Y - - - S S S V T M N T S H H I G A S S S S H N L N Q M - - - - - - L M S N N H Y N P N N T S S S M H Q Y G N I E
pt013956_POPTR_    I N H A R P P S F S D T V T T A H N M V R P N Q G A S F Q Q P F G S N S D L V S N Q T F L D N N N Q L - - - - - - - V E
pt015103_POPTR_    I N H A R P P S F S D T V T T T H T - V H P N Q S A S F H Q P F S S S S D L I S H Q E F L D N N N R L - - - - - - - V E
 
AT1G71930.1     L P Q L D S P - - - - - S L S P S L G T N K D Q N E S F E Q E E E K S F N C - - - V D W R T L D T L L E T Q - - - - - -
pt013956_POPTR_    L P E L D S P S T L S T S F A A K E G N F H Q T N E D Y - - D E E R S N N S S Q Y I D W K N F D T L L A S Q R D V V E H
pt015103_POPTR_    L P Q L D S P S T L S T S F A P K E G N F H Q T N E D Y - - D D E R S N N S S Q Y I D W K S L D T L L A S Q - - - - - -
 
AT1G71930.1     - - V I H P H N P N I L M F E T Q S Y N P A P S F P S M H Q S Y N E V - - - E A N I H H S L G C F P D S
pt013956_POPTR_    Q L L L Q N H - - - V A T L P S A S S V P V E S F - - - - - - - - - - - - - - - - - - - - - - - - - - -
pt015103_POPTR_    - - - - - - - - - - - V N D S S T S S F P L Q N F P S I T Q N Y D L A A G Q Q D H V S H F L D C F P D I
 
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