fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G71930.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb030299 not found in 506aa AT1G71930.1 1st_1st 0.386327503 Ib
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G71930.1     ------MDNIMQSSMPPGFRFHPTEEELVGYYLDRKINSMKSALDVIVEIDLYKMEPWDI
Sb030299_Sorbi1 LADRPRMDQQEESCVPPGFRFHPTEEELVGYYLARKVASQKIDLDIIQEVDLYRIEPWDL
                      **:  :*.:****************** **: * *  **:* *:***::****:

AT1G71930.1     QARCKL----GYEEQ-NEWYFFSHKDRKYPTGTRTNRATAAGFWKATGRDKAVLSKNS--
Sb030299_Sorbi1 QERCRQHAGGGHDEQTTEWYFFSYKDRKYPSGTRTNRATAAGFWKATGRDKPVLSSSCTR
                * **:     *::** .******:******:********************.***...  

AT1G71930.1     ----------VIGMRKTLVYYKGRAPNGRKSDWIMHEYRLQNSELAPVQEEGWVVCRAFR
Sb030299_Sorbi1 TSRCGGGSRVVIGMRKTLVFYKGRAPNGRKSDWIMHEYRLQSNEHAPAQEEGWVVCRAFQ
                          *********:*********************..* **.***********:

AT1G71930.1     KPIPN-QRPL-------GYEPWQNQLYHVESSNNYSSSVTMNTSHHIGASSSS--HNLNQ
Sb030299_Sorbi1 KPIPNQQRPFFPTSYGAGYYD-----HHLSTTTTTRLNVDGDRHMHFLGSSSALLHHPAG
                ***** ***:       **       :*:.::..   .*  :   *: .***:  *:   

AT1G71930.1     MLMS---NNHYNPNNTSSSMHQYGNIELPQLDSPS-------------LSPSLG--TNKD
Sb030299_Sorbi1 LLSSFPPSSLYSDDDLESKKHLF---SMPPLESPTAAIACCSDGGGGGYAPATTQRSSYD
                :* *   .. *. :: .*. * :   .:* *:**:              :*:    :. *

AT1G71930.1     QNESFEQEE-------EKSFNCVDWRTLDTLLETQVIHPHNPNILMFETQSYNPAPSFPS
Sb030299_Sorbi1 EHELMIQQEGGEGEQAAAAAGAIDWNFLDSLLSAT-------------SQLHGPSGSLLQ
                ::* : *:*         : ..:**. **:**.:              :* :.*: *: .

AT1G71930.1     MHQSYNEVEANIHHSLGCFPDS
Sb030299_Sorbi1 ----------------------
BoxShade v3.31 C (beta, 970507) Output
AT1G71930.1     - - - - - - M D N I M Q S S M P P G F R F H P T E E E L V G Y Y L D R K I N S M K S A L D V I V E I D L Y K M E P W D I
Sb030299_Sorbi1    L A D R P R M D Q Q E E S C V P P G F R F H P T E E E L V G Y Y L A R K V A S Q K I D L D I I Q E V D L Y R I E P W D L
 
AT1G71930.1     Q A R C K L - - - - G Y E E Q - N E W Y F F S H K D R K Y P T G T R T N R A T A A G F W K A T G R D K A V L S K N S - -
Sb030299_Sorbi1    Q E R C R Q H A G G G H D E Q T T E W Y F F S Y K D R K Y P S G T R T N R A T A A G F W K A T G R D K P V L S S S C T R
 
AT1G71930.1     - - - - - - - - - - V I G M R K T L V Y Y K G R A P N G R K S D W I M H E Y R L Q N S E L A P V Q E E G W V V C R A F R
Sb030299_Sorbi1    T S R C G G G S R V V I G M R K T L V F Y K G R A P N G R K S D W I M H E Y R L Q S N E H A P A Q E E G W V V C R A F Q
 
AT1G71930.1     K P I P N - Q R P L - - - - - - - G Y E P W Q N Q L Y H V E S S N N Y S S S V T M N T S H H I G A S S S S - - H N L N Q
Sb030299_Sorbi1    K P I P N Q Q R P F F P T S Y G A G Y Y D - - - - - H H L S T T T T T R L N V D G D R H M H F L G S S S A L L H H P A G
 
AT1G71930.1     M L M S - - - N N H Y N P N N T S S S M H Q Y G N I E L P Q L D S P S - - - - - - - - - - - - - L S P S L G - - T N K D
Sb030299_Sorbi1    L L S S F P P S S L Y S D D D L E S K K H L F - - - S M P P L E S P T A A I A C C S D G G G G G Y A P A T T Q R S S Y D
 
AT1G71930.1     Q N E S F E Q E E - - - - - - - E K S F N C V D W R T L D T L L E T Q V I H P H N P N I L M F E T Q S Y N P A P S F P S
Sb030299_Sorbi1    E H E L M I Q Q E G G E G E Q A A A A A G A I D W N F L D S L L S A T - - - - - - - - - - - - - S Q L H G P S G S L L Q
 
AT1G71930.1     M H Q S Y N E V E A N I H H S L G C F P D S
Sb030299_Sorbi1    - - - - - - - - - - - - - - - - - - - - - -
 
0