fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G71930.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm055013 not found in 359aa AT1G71930.1 not_1st 0.462639109 II
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G71930.1     ------------MDNIMQSSMPPGFRFHPTEEELVGYYLDRKINSMKSALDVIVEIDLYK
gm055013_Glyma2 MTLAPIPERSSSID--MESCVPPGFRFHPTEEELVGYYLKRKINSLKIDLDVIVEIDLYK
                            :*  *:*.:******************.*****:*  ***********

AT1G71930.1     MEPWDIQARCKLGYEEQNEWYFFSHKDRKYPTGTRTNRATAAGFWKATGRDKAVLSKNSV
gm055013_Glyma2 MEPWDIQDRCKLGYEQQNEWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKAVMSKNRI
                ******* *******:***********:**************************:*** :

AT1G71930.1     IGMRKTLVYYKGRAPNGRKSDWIMHEYRLQNSELAP------------------VQEEGW
gm055013_Glyma2 IGMRKTLVFYKGRAPNGRKTDWIMHEYRHQTSEHGPPQYHEKLKVAEVGSKLFLLQEEGW
                ********:**********:******** *.** .*                  :*****

AT1G71930.1     VVCRAFRKPIPNQRPLGYEPW-----QNQLYHVESSNNYSSSVTM--------NTSHHIG
gm055013_Glyma2 VVCRAFRKPSPSHRQ-GFDPWCSTSSQQQHFFRDQIQSYARPLSIADILNETNNVPHPVE
                ********* *.:*  *::**     *:* :. :. :.*: .:::        *..* : 

AT1G71930.1     ASSSSHNLNQMLMSNNHYNPNNTSSS----MHQYGNIELPQLDSPSLSPSLGT-NKDQNE
gm055013_Glyma2 GTSFSHSFN----SDNQQHLNNIISNQTAIIMDKQLLELPQLDSPTASLAIKECNQQQHN
                .:* **.:*    *:*: : **  *.    : :   :********: * ::   *::*::

AT1G71930.1     SFEQEE-------EKSFNCVDWRTLDTLLETQVIHPHNPNILMFETQSYNPAPSFPSMHQ
gm055013_Glyma2 GLTNEEYCSDERSNSSAQGIDWKSFDNLFGSQ----------LSDNAAYFSHPNLP-LVM
                .: :**       :.* : :**:::*.*: :*          : :. :* . *.:* :  

AT1G71930.1     SYNEVEANIHHSLGCFPDS
gm055013_Glyma2 PHNHDQAS--HILGCFPDS
                .:*. :*.  * *******
BoxShade v3.31 C (beta, 970507) Output
AT1G71930.1     - - - - - - - - - - - - M D N I M Q S S M P P G F R F H P T E E E L V G Y Y L D R K I N S M K S A L D V I V E I D L Y K
gm055013_Glyma2    M T L A P I P E R S S S I D - - M E S C V P P G F R F H P T E E E L V G Y Y L K R K I N S L K I D L D V I V E I D L Y K
 
AT1G71930.1     M E P W D I Q A R C K L G Y E E Q N E W Y F F S H K D R K Y P T G T R T N R A T A A G F W K A T G R D K A V L S K N S V
gm055013_Glyma2    M E P W D I Q D R C K L G Y E Q Q N E W Y F F S H K D K K Y P T G T R T N R A T A A G F W K A T G R D K A V M S K N R I
 
AT1G71930.1     I G M R K T L V Y Y K G R A P N G R K S D W I M H E Y R L Q N S E L A P - - - - - - - - - - - - - - - - - - V Q E E G W
gm055013_Glyma2    I G M R K T L V F Y K G R A P N G R K T D W I M H E Y R H Q T S E H G P P Q Y H E K L K V A E V G S K L F L L Q E E G W
 
AT1G71930.1     V V C R A F R K P I P N Q R P L G Y E P W - - - - - Q N Q L Y H V E S S N N Y S S S V T M - - - - - - - - N T S H H I G
gm055013_Glyma2    V V C R A F R K P S P S H R Q - G F D P W C S T S S Q Q Q H F F R D Q I Q S Y A R P L S I A D I L N E T N N V P H P V E
 
AT1G71930.1     A S S S S H N L N Q M L M S N N H Y N P N N T S S S - - - - M H Q Y G N I E L P Q L D S P S L S P S L G T - N K D Q N E
gm055013_Glyma2    G T S F S H S F N - - - - S D N Q Q H L N N I I S N Q T A I I M D K Q L L E L P Q L D S P T A S L A I K E C N Q Q Q H N
 
AT1G71930.1     S F E Q E E - - - - - - - E K S F N C V D W R T L D T L L E T Q V I H P H N P N I L M F E T Q S Y N P A P S F P S M H Q
gm055013_Glyma2    G L T N E E Y C S D E R S N S S A Q G I D W K S F D N L F G S Q - - - - - - - - - - L S D N A A Y F S H P N L P - L V M
 
AT1G71930.1     S Y N E V E A N I H H S L G C F P D S
gm055013_Glyma2    P H N H D Q A S - - H I L G C F P D S
 
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