fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G71930.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm028436 not found in 346aa AT1G71930.1 1st_1st 0.472178060 Ia
Gm055013 not found in 359aa AT1G71930.1 not_1st 0.462639109 II
Gm030146 not found in 344aa AT2G18060.1 not_not 0.410174880 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT1G71930.1     ------------MDNIMQSSMPPGFRFHPTEEELVGYYLDRKINSMKSALDVIVEIDLYK
gm055013_Glyma2 MTLAPIPERSSSID--MESCVPPGFRFHPTEEELVGYYLKRKINSLKIDLDVIVEIDLYK
gm028436_Glyma1 MSLTQIPERSSSID--MESCVPPGFRFHPTEDELVGYYLKRKINSLKIDLDVIVEIDLYK
gm030146_Glyma1 ------------MES-MESCVPPGFRFHPTDEELVGYYLRKKVASQKIDLDVIREIDLYR
                            ::  *:*.:*********::******* :*: * *  **** *****:

AT1G71930.1     MEPWDIQARCKLGYEEQNEWYFFSHKDRKYPTGTRTNRATAAGFWKATGRDKAVLSKNSV
gm055013_Glyma2 MEPWDIQDRCKLGYEQQNEWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKAVMSKNRI
gm028436_Glyma1 MEPWDIQDRCKLGYEQQNEWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKAVMSKNRI
gm030146_Glyma1 IEPWDLQERCRIGYEEQNEWYFFSHKDKKYPTGTRTNRATMAGFWKATGRDKAVYERAKL
                :****:* **::***:***********:************ ************* .:  :

AT1G71930.1     IGMRKTLVYYKGRAPNGRKSDWIMHEYRLQNSELAPV------------------QEEGW
gm055013_Glyma2 IGMRKTLVFYKGRAPNGRKTDWIMHEYRHQTSEHGPPQYHEKLKVAEVGSKLFLLQEEGW
gm028436_Glyma1 IGMRKTLVFYKGRAPNGRKTDWIMHEYRHQTSEHGPP------------------QEEGW
gm030146_Glyma1 IGMRKTLVFYKGRAPNGQKSDWIMHEYRLESDENGPP------------------QEEGW
                ********:********:*:******** :..* .*                   *****

AT1G71930.1     VVCRAFRKPIPNQ-RPLGYE-PW-----QNQLYHVESSNNYSS-----------SVTMNT
gm055013_Glyma2 VVCRAFRKPSPSH-RQ-GFD-PWCSTSSQQQHFFRDQIQSY-AR--PLSIADILNETNNV
gm028436_Glyma1 VVCRAFRKPSPSH-RP-GFDHPWCSTSSQQQHFFRDQIQSYSSR--PLSIADILDETNNV
gm030146_Glyma1 VVCRAFKKKTTGQTKTINIE-GW-----ESSYFYDEASGATSTLVDPIEL----------
                ******:*  ..: :  . :  *     :.. :. :      :                 

AT1G71930.1     SHH-IGASSSSHNLNQMLMSNNHYNPNNTSSS----MHQYGNIELPQLDSPSLSP-----
gm055013_Glyma2 PHP-VEGTSFSHSFN----SDNQQHLNNIISNQTAIIMDKQLLELPQLDSPTASL-----
gm028436_Glyma1 PHPNAEGTSFSHPFS----SDHQQHLNNLLSNQTVAIMDKQLIELPQLDSPTASL-----
gm030146_Glyma1 ----ISRQSQSF-LAQNFMCKQELEADNLTC-----MHQDPFVQLPQLESPSLPLVKKPS
                        * *. :     ..:. . :*  .     : :   ::****:**: .      

AT1G71930.1     SLGT-NKDQNESFEQEE----EKSFNC----VDWRTLDTLLETQV-----IHPHNPNILM
gm055013_Glyma2 AIKECNQQQHNGLTNEEYCSDERS-NSSAQGIDWKSFDNLFGSQ---------------L
gm028436_Glyma1 AIKECNQQQHNGLTNEEYCSDERSNNSNAQGIDWKSLDNLFGSQ---------------L
gm030146_Glyma1 TVSLVSDNNNEGEDNQNRLL-FNNNNTKKVTTDWRALDKFVASQLSQEVNTHETNVGVLS
                ::   ..::::.  :::     .. *      **:::*.:. :*                

AT1G71930.1     FETQSYNPAPSFPSMHQSYNEVEANIHHSLGCFPDS---------
gm055013_Glyma2 SDNAAYFSHPNLPLV-MPHNHDQAS--HILGCFPDS---------
gm028436_Glyma1 SDNAAYFSHPNLPLM-MPHNHDQAS--HILGCFPDSS--------
gm030146_Glyma1 SSFEPHDDNHDMALLLLQSSRDEGN---RLSPFLNTSSDCDNGIC
                 .  .:    .:. :    .. :..    *. * ::
BoxShade v3.31 C (beta, 970507) Output
AT1G71930.1     - - - - - - - - - - - - M D N I M Q S S M P P G F R F H P T E E E L V G Y Y L D R K I N S M K S A L D V I V E I D L Y K
gm055013_Glyma2    M T L A P I P E R S S S I D - - M E S C V P P G F R F H P T E E E L V G Y Y L K R K I N S L K I D L D V I V E I D L Y K
gm028436_Glyma1    M S L T Q I P E R S S S I D - - M E S C V P P G F R F H P T E D E L V G Y Y L K R K I N S L K I D L D V I V E I D L Y K
gm030146_Glyma1    - - - - - - - - - - - - M E S - M E S C V P P G F R F H P T D E E L V G Y Y L R K K V A S Q K I D L D V I R E I D L Y R
 
AT1G71930.1     M E P W D I Q A R C K L G Y E E Q N E W Y F F S H K D R K Y P T G T R T N R A T A A G F W K A T G R D K A V L S K N S V
gm055013_Glyma2    M E P W D I Q D R C K L G Y E Q Q N E W Y F F S H K D K K Y P T G T R T N R A T A A G F W K A T G R D K A V M S K N R I
gm028436_Glyma1    M E P W D I Q D R C K L G Y E Q Q N E W Y F F S H K D K K Y P T G T R T N R A T A A G F W K A T G R D K A V M S K N R I
gm030146_Glyma1    I E P W D L Q E R C R I G Y E E Q N E W Y F F S H K D K K Y P T G T R T N R A T M A G F W K A T G R D K A V Y E R A K L
 
AT1G71930.1     I G M R K T L V Y Y K G R A P N G R K S D W I M H E Y R L Q N S E L A P V - - - - - - - - - - - - - - - - - - Q E E G W
gm055013_Glyma2    I G M R K T L V F Y K G R A P N G R K T D W I M H E Y R H Q T S E H G P P Q Y H E K L K V A E V G S K L F L L Q E E G W
gm028436_Glyma1    I G M R K T L V F Y K G R A P N G R K T D W I M H E Y R H Q T S E H G P P - - - - - - - - - - - - - - - - - - Q E E G W
gm030146_Glyma1    I G M R K T L V F Y K G R A P N G Q K S D W I M H E Y R L E S D E N G P P - - - - - - - - - - - - - - - - - - Q E E G W
 
AT1G71930.1     V V C R A F R K P I P N Q - R P L G Y E - P W - - - - - Q N Q L Y H V E S S N N Y S S - - - - - - - - - - - S V T M N T
gm055013_Glyma2    V V C R A F R K P S P S H - R Q - G F D - P W C S T S S Q Q Q H F F R D Q I Q S Y - A R - - P L S I A D I L N E T N N V
gm028436_Glyma1    V V C R A F R K P S P S H - R P - G F D H P W C S T S S Q Q Q H F F R D Q I Q S Y S S R - - P L S I A D I L D E T N N V
gm030146_Glyma1    V V C R A F K K K T T G Q T K T I N I E - G W - - - - - E S S Y F Y D E A S G A T S T L V D P I E L - - - - - - - - - -
 
AT1G71930.1     S H H - I G A S S S S H N L N Q M L M S N N H Y N P N N T S S S - - - - M H Q Y G N I E L P Q L D S P S L S P - - - - -
gm055013_Glyma2    P H P - V E G T S F S H S F N - - - - S D N Q Q H L N N I I S N Q T A I I M D K Q L L E L P Q L D S P T A S L - - - - -
gm028436_Glyma1    P H P N A E G T S F S H P F S - - - - S D H Q Q H L N N L L S N Q T V A I M D K Q L I E L P Q L D S P T A S L - - - - -
gm030146_Glyma1    - - - - I S R Q S Q S F - L A Q N F M C K Q E L E A D N L T C - - - - - M H Q D P F V Q L P Q L E S P S L P L V K K P S
 
AT1G71930.1     S L G T - N K D Q N E S F E Q E E - - - - E K S F N C - - - - V D W R T L D T L L E T Q V - - - - - I H P H N P N I L M
gm055013_Glyma2    A I K E C N Q Q Q H N G L T N E E Y C S D E R S - N S S A Q G I D W K S F D N L F G S Q - - - - - - - - - - - - - - - L
gm028436_Glyma1    A I K E C N Q Q Q H N G L T N E E Y C S D E R S N N S N A Q G I D W K S L D N L F G S Q - - - - - - - - - - - - - - - L
gm030146_Glyma1    T V S L V S D N N N E G E D N Q N R L L - F N N N N T K K V T T D W R A L D K F V A S Q L S Q E V N T H E T N V G V L S
 
AT1G71930.1     F E T Q S Y N P A P S F P S M H Q S Y N E V E A N I H H S L G C F P D S - - - - - - - - -
gm055013_Glyma2    S D N A A Y F S H P N L P L V - M P H N H D Q A S - - H I L G C F P D S - - - - - - - - -
gm028436_Glyma1    S D N A A Y F S H P N L P L M - M P H N H D Q A S - - H I L G C F P D S S - - - - - - - -
gm030146_Glyma1    S S F E P H D D N H D M A L L L L Q S S R D E G N - - - R L S P F L N T S S D C D N G I C
 
0