fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G72050.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt013413 not found in 283aa AT1G72050.2 1st_not 0.549432739 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G72050.1     MFERSFTCYVDDCAASYRRKDHLNRHLLTHKGKLFKCPKENCKSEFSVQGNVGRHVKKYH
pt013413_POPTR_ ------MCSVDDCHASYRRKDHLTRHLLHHEGKLFKCEIENCDRKFVYLSNLKRHVRELH
                       * **** *********.**** *:******  ***. :*   .*: ***:: *

AT1G72050.1     SNDNRDKDNTGLGDGDKDNTCKGDDDKEKSGSGGCEKENEGNGGSGKDNNGNGDSQPAEC
pt013413_POPTR_ ------------------------DESSSSSSVG--------------------------
                                        *:...*.* *                          

AT1G72050.1     STGQKQVVCKEIGCGKAFKYPSQLQKHQDSHVKLDSVEAFCSEPGCMKYFTNEECLKSHI
pt013413_POPTR_ --GEKQYVCQELGCGKAFRYPSKLQKHEDSHINLDSMEAMCIEPGCMKHFSNKKCLKAHI
                  *:** **:*:******:***:****:***::***:**:* ******:*:*::***:**

AT1G72050.1     RSCHQHINCEICGSKHLKKNIKRHLRTHDE-DSSPGEIKCEVEGCSSTFSKASNLQKHMK
pt013413_POPTR_ QSCHQYINCDICGTKQLRKNIKRHLCTHEPVNGSTERIKCHFKGCQHAFSTKTNLNQHVK
                :****:***:***:*:*:******* **:  :.*. .***..:**. :**. :**::*:*

AT1G72050.1     AVHDDIRPFVCGFPGCGMRFAYKHVRNKHENSGYHVYTCGDFVETDEDFTSRPRGGLKRK
pt013413_POPTR_ AVHLEQRPYVCGFPGCDMRFSYKHVRDKHEKSGLHVYTPGDFVESDQQFRSRPRGGRKRK
                *** : **:*******.***:*****:***:** **** *****:*::* ****** ***

AT1G72050.1     QVTAEMLVRKRVMPPRFDAEEHETC--------------------
pt013413_POPTR_ FPTVEMLIRKRVTPP----TEFDECHTLLHEMEAEDPVVSHALPT
                  *.***:**** **     *.: *
BoxShade v3.31 C (beta, 970507) Output
AT1G72050.1     M F E R S F T C Y V D D C A A S Y R R K D H L N R H L L T H K G K L F K C P K E N C K S E F S V Q G N V G R H V K K Y H
pt013413_POPTR_    - - - - - - M C S V D D C H A S Y R R K D H L T R H L L H H E G K L F K C E I E N C D R K F V Y L S N L K R H V R E L H
 
AT1G72050.1     S N D N R D K D N T G L G D G D K D N T C K G D D D K E K S G S G G C E K E N E G N G G S G K D N N G N G D S Q P A E C
pt013413_POPTR_    - - - - - - - - - - - - - - - - - - - - - - - - D E S S S S S S V G - - - - - - - - - - - - - - - - - - - - - - - - - -
 
AT1G72050.1     S T G Q K Q V V C K E I G C G K A F K Y P S Q L Q K H Q D S H V K L D S V E A F C S E P G C M K Y F T N E E C L K S H I
pt013413_POPTR_    - - G E K Q Y V C Q E L G C G K A F R Y P S K L Q K H E D S H I N L D S M E A M C I E P G C M K H F S N K K C L K A H I
 
AT1G72050.1     R S C H Q H I N C E I C G S K H L K K N I K R H L R T H D E - D S S P G E I K C E V E G C S S T F S K A S N L Q K H M K
pt013413_POPTR_    Q S C H Q Y I N C D I C G T K Q L R K N I K R H L C T H E P V N G S T E R I K C H F K G C Q H A F S T K T N L N Q H V K
 
AT1G72050.1     A V H D D I R P F V C G F P G C G M R F A Y K H V R N K H E N S G Y H V Y T C G D F V E T D E D F T S R P R G G L K R K
pt013413_POPTR_    A V H L E Q R P Y V C G F P G C D M R F S Y K H V R D K H E K S G L H V Y T P G D F V E S D Q Q F R S R P R G G R K R K
 
AT1G72050.1     Q V T A E M L V R K R V M P P R F D A E E H E T C - - - - - - - - - - - - - - - - - - - -
pt013413_POPTR_    F P T V E M L I R K R V T P P - - - - T E F D E C H T L L H E M E A E D P V V S H A L P T
 
0