fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G72740.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm016988 not found in 285aa AT1G72740.2 1st_not 0.438095238 II
Pt009112 not found in 279aa AT1G72740.2 1st_not 0.44 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT1G72740.1     MGNQKLKWTAEEEEALLAGIRKHGPGKWKNILRDPEFADQLIHRSNIDLKDKWRNLSVPP
gm016988_Glyma0 MGNQKQKWTQDEEDALIAGVEKHGPGKWKNILKDPQFAPFLTSRSNIDLKDKWRNLSVSN
pt009112_POPTR_ MGNPKQKWKSEEEEALRAGIAKHGTGKWKNIQRDPEFNPYLRSRSNIDLKDKWRNMTVSA
                *** * **. :**:** **: ***.****** :**:*   *  ************::*. 

AT1G72740.1     GTQSLTNKARPAKVKEEGDTPAADANDAVTIPRPIPTIPPPPGRRTLPSELIPD-----E
gm016988_Glyma0 GAQGSKEKSRVPKPKAFSAPPATTATTATP-----QNASPAPQSASSDAAVAPDASQNDQ
pt009112_POPTR_ GSQSVKDKSRTLKAK--SSPDAAAVVAAST-----PLSNPHTSAVAAVDVVIDDSSEAAA
                *:*. .:*:*  * *  . . *: .  * .         * .   :    :  *      

AT1G72740.1     NTKNAPRYDGVIFEALSALADGNGSDVSSIYHFIEPR-HEVPPNFRRILSTRLRRLAAQS
gm016988_Glyma0 DAKNPPRYNALIFEALSALKDSNGSDMNAIIKFMEQKNHQVNQNFKRALSTRLRRLVSQG
pt009112_POPTR_ DSKTAPKYNAMIFEAISALNEPNGADTSAIISYIERR-QELPQNFRRQLSSRLRRLVAQE
                ::*..*:*:.:****:*** : **:* .:*  ::* : :::  **:* **:*****.:* 

AT1G72740.1     KLEKVSTFKSIQNFYKIPDPS--GTKIGVPKPKETH-TKLRQANNQTSADSQQMIEEAAI
gm016988_Glyma0 KLEKV------PNGYKVKKEASSGTKSPSPKAKDVRPPQPQRQSPASLFMTNDTLKEAAD
pt009112_POPTR_ KLEKV------QNFYKIKKASSFGTKTPTPKQKEVR-PKPEQNT--GLINSGDTVAEAAD
                *****       * **: . :  ***   ** *:.: .: .: .      : : : *** 

AT1G72740.1     TAACKVVEAENKIDVAKLAAEEFEKMTKIAEENRKLLVIATEMHELCSCGETMLLA
gm016988_Glyma0 TAAYRVADAESKSYLAAEAVKEAEKISLLVEHSDSMLQLAKDIYEQCSRGEIILLA
pt009112_POPTR_ DAAYMVAEAENKSFVATEAVKESERVSKMAEDANSLLQLANEILEKCLRGEIVVMG
                 **  *.:**.*  :*  *.:* *::: :.*.  .:* :*.:: * *  ** :::.
BoxShade v3.31 C (beta, 970507) Output
AT1G72740.1     M G N Q K L K W T A E E E E A L L A G I R K H G P G K W K N I L R D P E F A D Q L I H R S N I D L K D K W R N L S V P P
gm016988_Glyma0    M G N Q K Q K W T Q D E E D A L I A G V E K H G P G K W K N I L K D P Q F A P F L T S R S N I D L K D K W R N L S V S N
pt009112_POPTR_    M G N P K Q K W K S E E E E A L R A G I A K H G T G K W K N I Q R D P E F N P Y L R S R S N I D L K D K W R N M T V S A
 
AT1G72740.1     G T Q S L T N K A R P A K V K E E G D T P A A D A N D A V T I P R P I P T I P P P P G R R T L P S E L I P D - - - - - E
gm016988_Glyma0    G A Q G S K E K S R V P K P K A F S A P P A T T A T T A T P - - - - - Q N A S P A P Q S A S S D A A V A P D A S Q N D Q
pt009112_POPTR_    G S Q S V K D K S R T L K A K - - S S P D A A A V V A A S T - - - - - P L S N P H T S A V A A V D V V I D D S S E A A A
 
AT1G72740.1     N T K N A P R Y D G V I F E A L S A L A D G N G S D V S S I Y H F I E P R - H E V P P N F R R I L S T R L R R L A A Q S
gm016988_Glyma0    D A K N P P R Y N A L I F E A L S A L K D S N G S D M N A I I K F M E Q K N H Q V N Q N F K R A L S T R L R R L V S Q G
pt009112_POPTR_    D S K T A P K Y N A M I F E A I S A L N E P N G A D T S A I I S Y I E R R - Q E L P Q N F R R Q L S S R L R R L V A Q E
 
AT1G72740.1     K L E K V S T F K S I Q N F Y K I P D P S - - G T K I G V P K P K E T H - T K L R Q A N N Q T S A D S Q Q M I E E A A I
gm016988_Glyma0    K L E K V - - - - - - P N G Y K V K K E A S S G T K S P S P K A K D V R P P Q P Q R Q S P A S L F M T N D T L K E A A D
pt009112_POPTR_    K L E K V - - - - - - Q N F Y K I K K A S S F G T K T P T P K Q K E V R - P K P E Q N T - - G L I N S G D T V A E A A D
 
AT1G72740.1     T A A C K V V E A E N K I D V A K L A A E E F E K M T K I A E E N R K L L V I A T E M H E L C S C G E T M L L A
gm016988_Glyma0    T A A Y R V A D A E S K S Y L A A E A V K E A E K I S L L V E H S D S M L Q L A K D I Y E Q C S R G E I I L L A
pt009112_POPTR_    D A A Y M V A E A E N K S F V A T E A V K E S E R V S K M A E D A N S L L Q L A N E I L E K C L R G E I V V M G
 
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