fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G72740.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm021824 not found in 281aa AT1G17520.1 not_not 0.434285714 III
Pt005817 not found in 275aa AT1G17520.1 not_not 0.419047619 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT1G72740.1     MGNQKLKWTAEEEEALLAGIRKHGPGKWKNILRDPEFADQLIHRSNIDLKDKWRNLSVPP
gm021824_Glyma0 MGNQKQKWTQDEEDALIAGVEKHGPGKWKNILKDPQFAPFLTSRSNIDLKDKWRNLSVSN
pt005817_POPTR_ MGNPKQKWTSEEEEALRAGVAKHGTGKWKNIQRDPEFNPYLYSRSNIDLKDKWRNMTVSA
                *** * *** :**:** **: ***.****** :**:*   *  ************::*. 

AT1G72740.1     GTQSLTNKARPAKVKEEGDTPAADANDAVTIPRPIPTIPPPPGRRTLPSELIPDE-----
gm021824_Glyma0 GAQGSKEKSRVPKLKALP---APPA------PTATPQ-NAAPALQNAASDVTPPDASQND
pt005817_POPTR_ GSQSVKDKSRTTKVKSIPDAAAAAT------PLPNPQTSAASAAAAAAADVAIDDYSEAA
                *:*. .:*:* .*:*      *. :      * . *   ....    .:::   :     

AT1G72740.1     -NTKNAPRYDGVIFEALSALADGNGSDVSSIYHFIEPRH-EVPPNFRRILSTRLRRLAAQ
gm021824_Glyma0 QDAKNPPRYNAMIFEALSALKDSNGSDMNAIIKFMEQKNLQVNQNFRRALSTKLRRLVSQ
pt005817_POPTR_ ADSKTAPKYNAMIFEAISAFNEPNGADTSAIISYIEQRQ-ELPQNFRRQLSSRLRRLVAQ
                 ::*..*:*:.:****:**: : **:* .:*  ::* :: ::  **** **::****.:*

AT1G72740.1     SKLEKVSTFKSIQNFYKIPDPS--GTKIGVPKPKETH-TKLRQANNQTSADSQQMIEEAA
gm021824_Glyma0 GKLEKV------QNGYKVKKEASSGTKSPSPKPKDVRPPQPQQQSPASVLMTNDTIKEAA
pt005817_POPTR_ EKLEKV------QNCYKIKKVSSFGTKTPTPK-KEVR--------PKSVHDTGDTVEGAA
                 *****      ** **: . :  ***   ** *:.:          :   : : :: **

AT1G72740.1     ITAACKVVEAENKIDVAKLAAEEFEKMTKIAEENRKLLVIATEMHELCSCGETMLLA
gm021824_Glyma0 DTAAYRVADAESKSYLAAEAVKEAEKISLLVEHSDSMLQLAKDIYEQCSRGEIILLA
pt005817_POPTR_ NDAAYSVAEAENKSFVATEAVKESERVSKMSEDADSLLQLANEILEKCLRGEIVIMG
                  **  *.:**.*  :*  *.:* *::: : *.  .:* :*.:: * *  ** :::.
BoxShade v3.31 C (beta, 970507) Output
AT1G72740.1     M G N Q K L K W T A E E E E A L L A G I R K H G P G K W K N I L R D P E F A D Q L I H R S N I D L K D K W R N L S V P P
gm021824_Glyma0    M G N Q K Q K W T Q D E E D A L I A G V E K H G P G K W K N I L K D P Q F A P F L T S R S N I D L K D K W R N L S V S N
pt005817_POPTR_    M G N P K Q K W T S E E E E A L R A G V A K H G T G K W K N I Q R D P E F N P Y L Y S R S N I D L K D K W R N M T V S A
 
AT1G72740.1     G T Q S L T N K A R P A K V K E E G D T P A A D A N D A V T I P R P I P T I P P P P G R R T L P S E L I P D E - - - - -
gm021824_Glyma0    G A Q G S K E K S R V P K L K A L P - - - A P P A - - - - - - P T A T P Q - N A A P A L Q N A A S D V T P P D A S Q N D
pt005817_POPTR_    G S Q S V K D K S R T T K V K S I P D A A A A A T - - - - - - P L P N P Q T S A A S A A A A A A A D V A I D D Y S E A A
 
AT1G72740.1     - N T K N A P R Y D G V I F E A L S A L A D G N G S D V S S I Y H F I E P R H - E V P P N F R R I L S T R L R R L A A Q
gm021824_Glyma0    Q D A K N P P R Y N A M I F E A L S A L K D S N G S D M N A I I K F M E Q K N L Q V N Q N F R R A L S T K L R R L V S Q
pt005817_POPTR_    A D S K T A P K Y N A M I F E A I S A F N E P N G A D T S A I I S Y I E Q R Q - E L P Q N F R R Q L S S R L R R L V A Q
 
AT1G72740.1     S K L E K V S T F K S I Q N F Y K I P D P S - - G T K I G V P K P K E T H - T K L R Q A N N Q T S A D S Q Q M I E E A A
gm021824_Glyma0    G K L E K V - - - - - - Q N G Y K V K K E A S S G T K S P S P K P K D V R P P Q P Q Q Q S P A S V L M T N D T I K E A A
pt005817_POPTR_    E K L E K V - - - - - - Q N C Y K I K K V S S F G T K T P T P K - K E V R - - - - - - - - P K S V H D T G D T V E G A A
 
AT1G72740.1     I T A A C K V V E A E N K I D V A K L A A E E F E K M T K I A E E N R K L L V I A T E M H E L C S C G E T M L L A
gm021824_Glyma0    D T A A Y R V A D A E S K S Y L A A E A V K E A E K I S L L V E H S D S M L Q L A K D I Y E Q C S R G E I I L L A
pt005817_POPTR_    N D A A Y S V A E A E N K S F V A T E A V K E S E R V S K M S E D A D S L L Q L A N E I L E K C L R G E I V I M G
 
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