fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G72740.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt005817 not found in 275aa AT1G17520.1 not_not 0.419047619 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G72740.1     MGNQKLKWTAEEEEALLAGIRKHGPGKWKNILRDPEFADQLIHRSNIDLKDKWRNLSVPP
pt005817_POPTR_ MGNPKQKWTSEEEEALRAGVAKHGTGKWKNIQRDPEFNPYLYSRSNIDLKDKWRNMTVSA
                *** * ***:****** **: ***.****** *****   *  ************::*..

AT1G72740.1     GTQSLTNKARPAKVKEEGDTPAADANDAVTIPRPIPTIPPPPGRRTLPSELIPDE-----
pt005817_POPTR_ GSQSVKDKSRTTKVKSIPDAAAA------ATPLPNPQTSAASAAAAAAADVAIDDYSEAA
                *:**:.:*:*.:***.  *:.**      : * * *  .....  : .:::  *:     

AT1G72740.1     -NTKNAPRYDGVIFEALSALADGNGSDVSSIYHFIEPRHEVPPNFRRILSTRLRRLAAQS
pt005817_POPTR_ ADSKTAPKYNAMIFEAISAFNEPNGADTSAIISYIEQRQELPQNFRRQLSSRLRRLVAQE
                 ::*.**:*:.:****:**: : **:*.*:*  :** *:*:* **** **:*****.**.

AT1G72740.1     KLEKVSTFKSIQNFYKIPDPS--GTKIGVPK----PKETHTKLRQANNQTSADSQQMIEE
pt005817_POPTR_ KLEKV------QNCYKIKKVSSFGTKTPTPKKEVRPKSVH------------DTGDTVEG
                *****      ** *** . *  ***  .**    **..*            *: : :* 

AT1G72740.1     AAITAACKVVEAENKIDVAKLAAEEFEKMTKIAEENRKLLVIATEMHELCSCGETMLLA
pt005817_POPTR_ AANDAAYSVAEAENKSFVATEAVKESERVSKMSEDADSLLQLANEILEKCLRGEIVIMG
                **  ** .*.*****  **. *.:* *:::*::*:  .** :*.*: * *  ** :::.
BoxShade v3.31 C (beta, 970507) Output
AT1G72740.1     M G N Q K L K W T A E E E E A L L A G I R K H G P G K W K N I L R D P E F A D Q L I H R S N I D L K D K W R N L S V P P
pt005817_POPTR_    M G N P K Q K W T S E E E E A L R A G V A K H G T G K W K N I Q R D P E F N P Y L Y S R S N I D L K D K W R N M T V S A
 
AT1G72740.1     G T Q S L T N K A R P A K V K E E G D T P A A D A N D A V T I P R P I P T I P P P P G R R T L P S E L I P D E - - - - -
pt005817_POPTR_    G S Q S V K D K S R T T K V K S I P D A A A A - - - - - - A T P L P N P Q T S A A S A A A A A A A D V A I D D Y S E A A
 
AT1G72740.1     - N T K N A P R Y D G V I F E A L S A L A D G N G S D V S S I Y H F I E P R H E V P P N F R R I L S T R L R R L A A Q S
pt005817_POPTR_    A D S K T A P K Y N A M I F E A I S A F N E P N G A D T S A I I S Y I E Q R Q E L P Q N F R R Q L S S R L R R L V A Q E
 
AT1G72740.1     K L E K V S T F K S I Q N F Y K I P D P S - - G T K I G V P K - - - - P K E T H T K L R Q A N N Q T S A D S Q Q M I E E
pt005817_POPTR_    K L E K V - - - - - - Q N C Y K I K K V S S F G T K T P T P K K E V R P K S V H - - - - - - - - - - - - D T G D T V E G
 
AT1G72740.1     A A I T A A C K V V E A E N K I D V A K L A A E E F E K M T K I A E E N R K L L V I A T E M H E L C S C G E T M L L A
pt005817_POPTR_    A A N D A A Y S V A E A E N K S F V A T E A V K E S E R V S K M S E D A D S L L Q L A N E I L E K C L R G E I V I M G
 
0