fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G72740.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm016988 not found in 285aa AT1G72740.2 1st_not 0.438095238 II
Gm021824 not found in 281aa AT1G17520.1 not_not 0.434285714 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT1G72740.1     MGNQKLKWTAEEEEALLAGIRKHGPGKWKNILRDPEFADQLIHRSNIDLKDKWRNLSVPP
gm016988_Glyma0 MGNQKQKWTQDEEDALIAGVEKHGPGKWKNILKDPQFAPFLTSRSNIDLKDKWRNLSVSN
gm021824_Glyma0 MGNQKQKWTQDEEDALIAGVEKHGPGKWKNILKDPQFAPFLTSRSNIDLKDKWRNLSVSN
                ***** *** :**:**:**:.***********:**:**  *  ***************. 

AT1G72740.1     GTQSLTNKARPAKVKEEGDTPAADANDAVTIPRPIPTIPPPPGRRT----LPSELIPDEN
gm016988_Glyma0 GAQGSKEKSRVPKPKAFSAPPATTATTAT----PQNASPAPQSASSDAAVAPDASQNDQD
gm021824_Glyma0 GAQGSKEKSRVPKLKALPAPP---APTAT----PQNAAPALQNAASDVT-PPDASQNDQD
                *:*. .:*:* .* *    .*   *  *.    *  : *.  .  :     *.    *::

AT1G72740.1     TKNAPRYDGVIFEALSALADGNGSDVSSIYHFIEPR-HEVPPNFRRILSTRLRRLAAQSK
gm016988_Glyma0 AKNPPRYNALIFEALSALKDSNGSDMNAIIKFMEQKNHQVNQNFKRALSTRLRRLVSQGK
gm021824_Glyma0 AKNPPRYNAMIFEALSALKDSNGSDMNAIIKFMEQKNLQVNQNFRRALSTKLRRLVSQGK
                :**.***:.:******** *.****:.:* :*:* :  :*  **:* ***:****.:*.*

AT1G72740.1     LEKVSTFKSIQNFYKIPD--PSGTKIGVPKPKETHTKLRQANNQTSAD---SQQMIEEAA
gm016988_Glyma0 LEKV------PNGYKVKKEASSGTKSPSPKAKDVRPP--QPQRQSPASLFMTNDTLKEAA
gm021824_Glyma0 LEKV------QNGYKVKKEASSGTKSPSPKPKDVRPP--QPQQQSPASVLMTNDTIKEAA
                ****       * **: .  .****   **.*:.:.   *.:.*:.*.   ::: ::***

AT1G72740.1     ITAACKVVEAENKIDVAKLAAEEFEKMTKIAEENRKLLVIATEMHELCSCGETMLLA
gm016988_Glyma0 DTAAYRVADAESKSYLAAEAVKEAEKISLLVEHSDSMLQLAKDIYEQCSRGEIILLA
gm021824_Glyma0 DTAAYRVADAESKSYLAAEAVKEAEKISLLVEHSDSMLQLAKDIYEQCSRGEIILLA
                 *** :*.:**.*  :*  *.:* **:: :.*.. .:* :*.:::* ** ** :***
BoxShade v3.31 C (beta, 970507) Output
AT1G72740.1     M G N Q K L K W T A E E E E A L L A G I R K H G P G K W K N I L R D P E F A D Q L I H R S N I D L K D K W R N L S V P P
gm016988_Glyma0    M G N Q K Q K W T Q D E E D A L I A G V E K H G P G K W K N I L K D P Q F A P F L T S R S N I D L K D K W R N L S V S N
gm021824_Glyma0    M G N Q K Q K W T Q D E E D A L I A G V E K H G P G K W K N I L K D P Q F A P F L T S R S N I D L K D K W R N L S V S N
 
AT1G72740.1     G T Q S L T N K A R P A K V K E E G D T P A A D A N D A V T I P R P I P T I P P P P G R R T - - - - L P S E L I P D E N
gm016988_Glyma0    G A Q G S K E K S R V P K P K A F S A P P A T T A T T A T - - - - P Q N A S P A P Q S A S S D A A V A P D A S Q N D Q D
gm021824_Glyma0    G A Q G S K E K S R V P K L K A L P A P P - - - A P T A T - - - - P Q N A A P A L Q N A A S D V T - P P D A S Q N D Q D
 
AT1G72740.1     T K N A P R Y D G V I F E A L S A L A D G N G S D V S S I Y H F I E P R - H E V P P N F R R I L S T R L R R L A A Q S K
gm016988_Glyma0    A K N P P R Y N A L I F E A L S A L K D S N G S D M N A I I K F M E Q K N H Q V N Q N F K R A L S T R L R R L V S Q G K
gm021824_Glyma0    A K N P P R Y N A M I F E A L S A L K D S N G S D M N A I I K F M E Q K N L Q V N Q N F R R A L S T K L R R L V S Q G K
 
AT1G72740.1     L E K V S T F K S I Q N F Y K I P D - - P S G T K I G V P K P K E T H T K L R Q A N N Q T S A D - - - S Q Q M I E E A A
gm016988_Glyma0    L E K V - - - - - - P N G Y K V K K E A S S G T K S P S P K A K D V R P P - - Q P Q R Q S P A S L F M T N D T L K E A A
gm021824_Glyma0    L E K V - - - - - - Q N G Y K V K K E A S S G T K S P S P K P K D V R P P - - Q P Q Q Q S P A S V L M T N D T I K E A A
 
AT1G72740.1     I T A A C K V V E A E N K I D V A K L A A E E F E K M T K I A E E N R K L L V I A T E M H E L C S C G E T M L L A
gm016988_Glyma0    D T A A Y R V A D A E S K S Y L A A E A V K E A E K I S L L V E H S D S M L Q L A K D I Y E Q C S R G E I I L L A
gm021824_Glyma0    D T A A Y R V A D A E S K S Y L A A E A V K E A E K I S L L V E H S D S M L Q L A K D I Y E Q C S R G E I I L L A
 
0