fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G72830.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt005997 YHEAKQLGLNLPDQES in 57/341 AT1G72830.1 1st_1st 0.252006420 Ib
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G72830.1     ---MMHQMLNKKDSATHSTLPYLNTSISWGVVPTDSVANRRGSAESLS----LKVDSRPG
pt005997_POPTR_ MALRIQNLLKKNFDEPHFTV----SCPSWW------NSNEQHFSPSLSKNINFKVDSSPQ
                    ::::*:*: . .* *:    :. **        :*.:  : ***    :**** * 

AT1G72830.1     HIQTTKQISFQ--DQDSSSTQSTGQSYTEVASSGDDNPSRQISFSAKSGSEITQRKGFAS
pt005997_POPTR_ PYHEAKQLGLNLPDQESSSTLSIGQSHNEMSAMGGTNSQGQ---CISSESDESCGKGVEG
                  : :**:.::  **:**** * ***:.*::: *. *.. *   . .* *: :  **. .

AT1G72830.1     NPKQGSMTGFPNIHFAPAQANFSFHY-------ADPHYGGLLAATYLPQA---PTCNPQM
pt005997_POPTR_ KMRPVLLLSTPDGVSNHSQADCSYSMVRTPYPCADPYFGGLFNP-YGPHAFIQPQMGSHM
                : :   : . *:     :**: *:         ***::***: . * *:*   *  ..:*

AT1G72830.1     VSMIPGRVPLPAELTETDPVFVNAKQYHAIMRRRQQRAKLEAQNKLIRARKPYLHESRHV
pt005997_POPTR_ VGMTAGRVPLPLDLADDGPIYVNAKQYHGILRRRQSRAKLEAQNKLVKNRKPYLHESRHI
                *.* .****** :*:: .*::*******.*:****.**********:: **********:

AT1G72830.1     HALKRPRGSGGRFLNTKKLLQESEQAAAREQEQDKLGQQVNRKTNMSRFEAHMLQNNKDR
pt005997_POPTR_ HALNRVRGSGGRFLSTKK-LQRSDPTSSHGQCNVLDTIHLHPKNNASELESFQSRTGQSS
                ***:* ********.*** **.*: :::: * :     ::: *.* *.:*:.  :..:. 

AT1G72830.1     SSTTSGSDITSVSDGADIFGHTEFQFSGFPTPINRAMLVHGQSNDMHGG----GDMHHFS
pt005997_POPTR_ ASNTTRSDTTSVSNSDVNFRQPDRGFSGIA-----AHLVGGRQ--INGGLMSSGNQHHAS
                :*.*: ** ****:.   * :.:  ***:.     * ** *:.  ::**    *: ** *

AT1G72830.1     VHI
pt005997_POPTR_ VVR
                *
BoxShade v3.31 C (beta, 970507) Output
AT1G72830.1     - - - M M H Q M L N K K D S A T H S T L P Y L N T S I S W G V V P T D S V A N R R G S A E S L S - - - - L K V D S R P G
pt005997_POPTR_    M A L R I Q N L L K K N F D E P H F T V - - - - S C P S W W - - - - - - N S N E Q H F S P S L S K N I N F K V D S S P Q
 
AT1G72830.1     H I Q T T K Q I S F Q - - D Q D S S S T Q S T G Q S Y T E V A S S G D D N P S R Q I S F S A K S G S E I T Q R K G F A S
pt005997_POPTR_    P Y H E A K Q L G L N L P D Q E S S S T L S I G Q S H N E M S A M G G T N S Q G Q - - - C I S S E S D E S C G K G V E G
 
AT1G72830.1     N P K Q G S M T G F P N I H F A P A Q A N F S F H Y - - - - - - - A D P H Y G G L L A A T Y L P Q A - - - P T C N P Q M
pt005997_POPTR_    K M R P V L L L S T P D G V S N H S Q A D C S Y S M V R T P Y P C A D P Y F G G L F N P - Y G P H A F I Q P Q M G S H M
 
AT1G72830.1     V S M I P G R V P L P A E L T E T D P V F V N A K Q Y H A I M R R R Q Q R A K L E A Q N K L I R A R K P Y L H E S R H V
pt005997_POPTR_    V G M T A G R V P L P L D L A D D G P I Y V N A K Q Y H G I L R R R Q S R A K L E A Q N K L V K N R K P Y L H E S R H I
 
AT1G72830.1     H A L K R P R G S G G R F L N T K K L L Q E S E Q A A A R E Q E Q D K L G Q Q V N R K T N M S R F E A H M L Q N N K D R
pt005997_POPTR_    H A L N R V R G S G G R F L S T K K - L Q R S D P T S S H G Q C N V L D T I H L H P K N N A S E L E S F Q S R T G Q S S
 
AT1G72830.1     S S T T S G S D I T S V S D G A D I F G H T E F Q F S G F P T P I N R A M L V H G Q S N D M H G G - - - - G D M H H F S
pt005997_POPTR_    A S N T T R S D T T S V S N S D V N F R Q P D R G F S G I A - - - - - A H L V G G R Q - - I N G G L M S S G N Q H H A S
 
AT1G72830.1     V H I
pt005997_POPTR_    V V R
 
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