fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G73410.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt023852 not found in 243aa AT1G17950.1 1st_not 0.535637149 II
Pt026618 not found in 236aa AT1G73410.1 not_1st 0.516198704 II
Pt003784 not found in 241aa AT1G73410.1 not_1st 0.490280777 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT1G73410.1     MIMCSRGHWRPAEDEKLKDLVEQYGPHNWNAIALKLPGRSGKSCRLRWFNQLDPRINRNP
pt023852_POPTR_ --MCTRGHWRPAEDEKLKELVEKYGPHNWNAIAEKLQGRSGKSCRLRWFNQLDPRINRSP
pt003784_POPTR_ --MSTRGHWRPAEDEKLRKLVDQYGPHNWNSIAEKLQGKSGKSCRLRWFNQLDPRINRSP
pt026618_POPTR_ --MCTRGHWRPAEDEKLKELVEKYGPHNWNAIAEKLHGRSGKSCRLRWFNQLDPRINRSP
                  *.:************:.**::*******:** ** *:*******************.*

AT1G73410.1     FTEEEEERLLAAHRIHGNRWSIIARLFPGRTDNAVKNHWHVIMARRTRQTSKPRLLPSTT
pt023852_POPTR_ FTEEEEERLLASHRIHGNRWAIIARFFPGRTDNAVKNHWHVIMARRYRERS--RLHAKRA
pt003784_POPTR_ FTEEEEERLLACQQIHGNKWAVIAKQFPGRTDNAVKNHWHIIMARKCRERS--RIHAKRA
pt026618_POPTR_ FTEEEEERLLASHRIHGNRWAVIARLFPGRTDNAVKNHWHVIMARRYRERS--RLHAKRT
                ***********.::****:*::**: **************:****: *: *  *: .. :

AT1G73410.1     SSSSLMASEQIMMSSGGYNHNYSSDDRKKI---FPADFI-NFPYKF----------SHIN
pt023852_POPTR_ AQT--LVNDN--------KLS-SKQDHMHM-DCETRNFS-SFSKKYCEKYGQYPMVTHSY
pt003784_POPTR_ ASQALLVNEQ--------THSFSNQDVMRIVNCEPRNLAPSFFHKFCESY------CDCY
pt026618_POPTR_ AQA--LVNEQ--------KFS-SKQD-MQI-NCETRSFS-SFVKKYCEKFGQYPLITHSY
                :.   :..::        . . *.:*  ::    . .:  .*  *:           .  

AT1G73410.1     HLHFL----KEFFTGKIALNHKANQSKKPMEFYNFLQVNTDSNKSEIIDQDSGQSKRSDS
pt023852_POPTR_ LPAFC----KEFYNEDPS--HCEDQS-RPIEFYDFLQVNTDSNKSEVID----NARRDDE
pt003784_POPTR_ HRPFCLNYPTSFCNENTS--H--HEG-KPLEFYDFLQVKTDSSKSEALD----NARRDDV
pt026618_POPTR_ LPAFW----KEFYNDDLS--NCKDQN-RPIEFYDFLQVNTESNKSEVID----NARREDE
                   *     ..* . . :  :  .:. :*:***:****:*:*.*** :*    :::*.* 

AT1G73410.1     DTKH---------ESHVPFFDFLSV-GNSAS
pt023852_POPTR_ EVDQQEALENNQSKADVPFIDFFSVNGKSSS
pt003784_POPTR_ EVDQ-EARELHQRKANFPFIDFLSA-GNSN-
pt026618_POPTR_ EVDQREVILEHQSKAGVPFIDFFSA------
                :..:         :: .**:**:*.
BoxShade v3.31 C (beta, 970507) Output
AT1G73410.1     M I M C S R G H W R P A E D E K L K D L V E Q Y G P H N W N A I A L K L P G R S G K S C R L R W F N Q L D P R I N R N P
pt023852_POPTR_    - - M C T R G H W R P A E D E K L K E L V E K Y G P H N W N A I A E K L Q G R S G K S C R L R W F N Q L D P R I N R S P
pt003784_POPTR_    - - M S T R G H W R P A E D E K L R K L V D Q Y G P H N W N S I A E K L Q G K S G K S C R L R W F N Q L D P R I N R S P
pt026618_POPTR_    - - M C T R G H W R P A E D E K L K E L V E K Y G P H N W N A I A E K L H G R S G K S C R L R W F N Q L D P R I N R S P
 
AT1G73410.1     F T E E E E E R L L A A H R I H G N R W S I I A R L F P G R T D N A V K N H W H V I M A R R T R Q T S K P R L L P S T T
pt023852_POPTR_    F T E E E E E R L L A S H R I H G N R W A I I A R F F P G R T D N A V K N H W H V I M A R R Y R E R S - - R L H A K R A
pt003784_POPTR_    F T E E E E E R L L A C Q Q I H G N K W A V I A K Q F P G R T D N A V K N H W H I I M A R K C R E R S - - R I H A K R A
pt026618_POPTR_    F T E E E E E R L L A S H R I H G N R W A V I A R L F P G R T D N A V K N H W H V I M A R R Y R E R S - - R L H A K R T
 
AT1G73410.1     S S S S L M A S E Q I M M S S G G Y N H N Y S S D D R K K I - - - F P A D F I - N F P Y K F - - - - - - - - - - S H I N
pt023852_POPTR_    A Q T - - L V N D N - - - - - - - - K L S - S K Q D H M H M - D C E T R N F S - S F S K K Y C E K Y G Q Y P M V T H S Y
pt003784_POPTR_    A S Q A L L V N E Q - - - - - - - - T H S F S N Q D V M R I V N C E P R N L A P S F F H K F C E S Y - - - - - - C D C Y
pt026618_POPTR_    A Q A - - L V N E Q - - - - - - - - K F S - S K Q D - M Q I - N C E T R S F S - S F V K K Y C E K F G Q Y P L I T H S Y
 
AT1G73410.1     H L H F L - - - - K E F F T G K I A L N H K A N Q S K K P M E F Y N F L Q V N T D S N K S E I I D Q D S G Q S K R S D S
pt023852_POPTR_    L P A F C - - - - K E F Y N E D P S - - H C E D Q S - R P I E F Y D F L Q V N T D S N K S E V I D - - - - N A R R D D E
pt003784_POPTR_    H R P F C L N Y P T S F C N E N T S - - H - - H E G - K P L E F Y D F L Q V K T D S S K S E A L D - - - - N A R R D D V
pt026618_POPTR_    L P A F W - - - - K E F Y N D D L S - - N C K D Q N - R P I E F Y D F L Q V N T E S N K S E V I D - - - - N A R R E D E
 
AT1G73410.1     D T K H - - - - - - - - - E S H V P F F D F L S V - G N S A S
pt023852_POPTR_    E V D Q Q E A L E N N Q S K A D V P F I D F F S V N G K S S S
pt003784_POPTR_    E V D Q - E A R E L H Q R K A N F P F I D F L S A - G N S N -
pt026618_POPTR_    E V D Q R E V I L E H Q S K A G V P F I D F F S A - - - - - -
 
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