fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G73410.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb020348 not found in 317aa AT1G73410.1 1st_1st 0.477321814 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G73410.1     MIMCSRGHWRPAEDEKLKDLVEQYGPHNWNAIALKLPGRSGKSCRLRWFNQLDPRINRNP
Sb020348_Sorbi1 --MCTRGHWRPSEDEKLKELVALYGPHNWNAIAEKLQGRSGKSCRLRWFNQLDPRINRSP
                  **:******:******:**  ********** ** *********************.*

AT1G73410.1     FTEEEEERLLAAHRIHGNRWSIIARLFPGRTDNAVKNHWHVIMARRTRQTSKPRLLPSTT
Sb020348_Sorbi1 FSEEEEELLLASHRVHGNRWAVIARLFPGRTDNAVKNHWHVIMARRCRE----RMRLSNR
                *:***** ***:**:*****::************************ *:    *:  *. 

AT1G73410.1     SSSSLMASEQIMMSSGGYNHNYSSDDRKKIFP-----ADFINFPYKFSHINHLHFLKEFF
Sb020348_Sorbi1 RGGG--AAGAAVAGAGAVEDDNNPRNAKKPRPDASSMASLLD-----------KYRREFS
                 ...  *:   : .:*. :.: .. : **  *     *.:::           :: :** 

AT1G73410.1     TGKIALNHKANQ-----------SKKPMEFYNFLQVNTDSNKSEIIDQDSGQS---KRSD
Sb020348_Sorbi1 VVPFAINHNSNQQDYCSTTNEADTNKSVEFYDFLQVNANSS-----DTKCGSSIEEQEEN
                .  :*:**::**           ::*.:***:*****::*.     * ..*.*   :..:

AT1G73410.1     SDTKHESHVPFFDFLSVGNSAS-
Sb020348_Sorbi1 RDDQAEGQVQFIDFLEVGASHRQ
                 * : *.:* *:***.** *
BoxShade v3.31 C (beta, 970507) Output
AT1G73410.1     M I M C S R G H W R P A E D E K L K D L V E Q Y G P H N W N A I A L K L P G R S G K S C R L R W F N Q L D P R I N R N P
Sb020348_Sorbi1    - - M C T R G H W R P S E D E K L K E L V A L Y G P H N W N A I A E K L Q G R S G K S C R L R W F N Q L D P R I N R S P
 
AT1G73410.1     F T E E E E E R L L A A H R I H G N R W S I I A R L F P G R T D N A V K N H W H V I M A R R T R Q T S K P R L L P S T T
Sb020348_Sorbi1    F S E E E E E L L L A S H R V H G N R W A V I A R L F P G R T D N A V K N H W H V I M A R R C R E - - - - R M R L S N R
 
AT1G73410.1     S S S S L M A S E Q I M M S S G G Y N H N Y S S D D R K K I F P - - - - - A D F I N F P Y K F S H I N H L H F L K E F F
Sb020348_Sorbi1    R G G G - - A A G A A V A G A G A V E D D N N P R N A K K P R P D A S S M A S L L D - - - - - - - - - - - K Y R R E F S
 
AT1G73410.1     T G K I A L N H K A N Q - - - - - - - - - - - S K K P M E F Y N F L Q V N T D S N K S E I I D Q D S G Q S - - - K R S D
Sb020348_Sorbi1    V V P F A I N H N S N Q Q D Y C S T T N E A D T N K S V E F Y D F L Q V N A N S S - - - - - D T K C G S S I E E Q E E N
 
AT1G73410.1     S D T K H E S H V P F F D F L S V G N S A S -
Sb020348_Sorbi1    R D D Q A E G Q V Q F I D F L E V G A S H R Q
 
0