fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G73410.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb020348 not found in 317aa AT1G73410.1 1st_1st 0.477321814 Ia
Sb012241 not found in 276aa AT1G73410.1 not_1st 0.403887688 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT1G73410.1     --------------MIMCSRGHWRPAEDEKLKDLVEQYGPHNWNAIALKLPGRSGKSCRL
Sb020348_Sorbi1 ----------------MCTRGHWRPSEDEKLKELVALYGPHNWNAIAEKLQGRSGKSCRL
Sb012241_Sorbi1 MPSSSTTNTSDGAKSSSCPRGHWRPGEDEKLKQLVEKYGPQNWNSIAEKLDGRSGKSCRL
                                 *.******.******:**  ***:***:** ** *********

AT1G73410.1     RWFNQLDPRINRNPFTEEEEERLLAAHRIHGNRWSIIARLFPGRTDNAVKNHWHVIMARR
Sb020348_Sorbi1 RWFNQLDPRINRSPFSEEEEELLLASHRVHGNRWAVIARLFPGRTDNAVKNHWHVIMARR
Sb012241_Sorbi1 RWFNQLDPRINKRPFTEEEEERLLNAHRAHGNKWALIARHFPGRTDNAVKNHWHVVMARR
                ***********: **:***** ** :** ***:*::*** ***************:****

AT1G73410.1     TRQTSKPRLLPSTTSSSSL-MASEQIMMSSGGYNHN------------------------
Sb020348_Sorbi1 CRE----RMRLSNRRGGG---AAGAAVAGAGAVEDD------------------------
Sb012241_Sorbi1 SRERS--RLLARAASSAASSPSAGGYLFGAGTPATSSLCFGFSKLGGGGSGGGLFSSPAA
                 *:    *:      ...   ::   : .:*    .                        

AT1G73410.1     YSSDDRKKIFP-----ADFINFPYKFSHINHLHFLKEFFTGKIALN--------------
Sb020348_Sorbi1 NNPRNAKKPRPDASSMASLLD-----------KYRREFSVVPFAIN--------------
Sb012241_Sorbi1 SPPTSLFKSFGTATGSKGFLGASFEAS--GRYNYSGKQLTAPLSITFASPSEALGMDIGH
                  . .  *         .::.           ::  :  .  :::.              

AT1G73410.1     ---HKANQ-----------SKKPMEFYNFLQVNTDSNKSEIIDQDSGQS---KRSDSDTK
Sb020348_Sorbi1 ---HNSNQQDYCSTTNEADTNKSVEFYDFLQVNANSS-----DTKCGSSIEEQEENRDDQ
Sb012241_Sorbi1 HGRHEHHQKDY-------------------------------HAASGDSADEPLKKKD--
                   *: :*                                  .  .*.*     .. *  

AT1G73410.1     HESHVPFFDFLSVGNSAS-
Sb020348_Sorbi1 AEGQVQFIDFLEVGASHRQ
Sb012241_Sorbi1 ----VPFIDFLGVGVSS--
                    * *:*** ** *
BoxShade v3.31 C (beta, 970507) Output
AT1G73410.1     - - - - - - - - - - - - - - M I M C S R G H W R P A E D E K L K D L V E Q Y G P H N W N A I A L K L P G R S G K S C R L
Sb020348_Sorbi1    - - - - - - - - - - - - - - - - M C T R G H W R P S E D E K L K E L V A L Y G P H N W N A I A E K L Q G R S G K S C R L
Sb012241_Sorbi1    M P S S S T T N T S D G A K S S S C P R G H W R P G E D E K L K Q L V E K Y G P Q N W N S I A E K L D G R S G K S C R L
 
AT1G73410.1     R W F N Q L D P R I N R N P F T E E E E E R L L A A H R I H G N R W S I I A R L F P G R T D N A V K N H W H V I M A R R
Sb020348_Sorbi1    R W F N Q L D P R I N R S P F S E E E E E L L L A S H R V H G N R W A V I A R L F P G R T D N A V K N H W H V I M A R R
Sb012241_Sorbi1    R W F N Q L D P R I N K R P F T E E E E E R L L N A H R A H G N K W A L I A R H F P G R T D N A V K N H W H V V M A R R
 
AT1G73410.1     T R Q T S K P R L L P S T T S S S S L - M A S E Q I M M S S G G Y N H N - - - - - - - - - - - - - - - - - - - - - - - -
Sb020348_Sorbi1    C R E - - - - R M R L S N R R G G G - - - A A G A A V A G A G A V E D D - - - - - - - - - - - - - - - - - - - - - - - -
Sb012241_Sorbi1    S R E R S - - R L L A R A A S S A A S S P S A G G Y L F G A G T P A T S S L C F G F S K L G G G G S G G G L F S S P A A
 
AT1G73410.1     Y S S D D R K K I F P - - - - - A D F I N F P Y K F S H I N H L H F L K E F F T G K I A L N - - - - - - - - - - - - - -
Sb020348_Sorbi1    N N P R N A K K P R P D A S S M A S L L D - - - - - - - - - - - K Y R R E F S V V P F A I N - - - - - - - - - - - - - -
Sb012241_Sorbi1    S P P T S L F K S F G T A T G S K G F L G A S F E A S - - G R Y N Y S G K Q L T A P L S I T F A S P S E A L G M D I G H
 
AT1G73410.1     - - - H K A N Q - - - - - - - - - - - S K K P M E F Y N F L Q V N T D S N K S E I I D Q D S G Q S - - - K R S D S D T K
Sb020348_Sorbi1    - - - H N S N Q Q D Y C S T T N E A D T N K S V E F Y D F L Q V N A N S S - - - - - D T K C G S S I E E Q E E N R D D Q
Sb012241_Sorbi1    H G R H E H H Q K D Y - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - H A A S G D S A D E P L K K K D - -
 
AT1G73410.1     H E S H V P F F D F L S V G N S A S -
Sb020348_Sorbi1    A E G Q V Q F I D F L E V G A S H R Q
Sb012241_Sorbi1    - - - - V P F I D F L G V G V S S - -
 
0