fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G73410.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm045477 not found in 234aa AT1G17950.1 1st_not 0.483801295 II
Gm010780 not found in 297aa AT1G73410.1 not_1st 0.414686825 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT1G73410.1     ---------MIMCSRGHWRPAEDEKLKDLVEQYGPHNWNAIALKLPGRSGKSCRLRWFNQ
gm045477_Glyma1 -----------MCSRGHWRPAEDEKLRELVEHYGPHNWNAIAEKLRGRSGKSCRLRWFNQ
gm010780_Glyma0 MEDSSAGEDTRTCPRGHWRPAEDEKLRQLVEQYGAQNWNSIAEKLQGRSGKSCRLRWFNQ
                            *.************::***:**.:***:** ** **************

AT1G73410.1     LDPRINRNPFTEEEEERLLAAHRIHGNRWSIIARLFPGRTDNAVKNHWHVIMARRTRQTS
gm045477_Glyma1 LDPRINRNPFTEEEEERLLASHRIHGNRWAVIARHFPGRTDNAVKNHWHVMMARIRRERS
gm010780_Glyma0 LDPRINRRPFTEEEEERLLAAHRIHGNKWALIARLFPGRTDNAVKNHWHVIMARKQREQS
                *******.************:******:*::*** ***************:***  *: *

AT1G73410.1     K--------------------------------PRLLPSTTSSSSLMASEQIMMSSGGYN
gm045477_Glyma1 KI-----------------------------NNPKLQP-------LFAPNL---------
gm010780_Glyma0 KLYMLFSTTRFGLENGRFFDFRSLDNNKDDDNNYRIVSDTTSSTSLASWNFASVPTTTST
                *                                 :: .       * : :          

AT1G73410.1     HNYSSDDRKKIFPADFINFPYKFSH----INHLHFL------KEFF------TGKIALNH
gm045477_Glyma1 ----KDDLEAI-PSFVEKYYEKYSHPCVTLTHSSFQF---PGKKFYFQDPSSAGSTVPPG
gm010780_Glyma0 TTKGARDYFNTSRSSSVYLSEIYPNPAFSLPNYKRVVPTSPFRTFLGSSDHHDGWII---
                      *      :        :.:    : :          : *        *      

AT1G73410.1     KANQSKKPMEFYNFLQVNTDSNKSEIIDQDSGQSKRS--DSDTKHES--------HVPFF
gm045477_Glyma1 KS----QSVEFYDFLQVNTDSNESEVTD----NARRD--DEEVSQDAVGQKNKDNGVPFI
gm010780_Glyma0 ----KRDLMSFCD----NNNNNSSSTFSKLKASTEKDHQQQQTNEDATNVEPK--EVPFI
                      . :.* :    *.:.*.*.  .    .:.:.  :.:...::         ***:

AT1G73410.1     DFLSVGNSAS
gm045477_Glyma1 DFLSTGGC--
gm010780_Glyma0 DFLGVGVSSS
                ***..* .
BoxShade v3.31 C (beta, 970507) Output
AT1G73410.1     - - - - - - - - - M I M C S R G H W R P A E D E K L K D L V E Q Y G P H N W N A I A L K L P G R S G K S C R L R W F N Q
gm045477_Glyma1    - - - - - - - - - - - M C S R G H W R P A E D E K L R E L V E H Y G P H N W N A I A E K L R G R S G K S C R L R W F N Q
gm010780_Glyma0    M E D S S A G E D T R T C P R G H W R P A E D E K L R Q L V E Q Y G A Q N W N S I A E K L Q G R S G K S C R L R W F N Q
 
AT1G73410.1     L D P R I N R N P F T E E E E E R L L A A H R I H G N R W S I I A R L F P G R T D N A V K N H W H V I M A R R T R Q T S
gm045477_Glyma1    L D P R I N R N P F T E E E E E R L L A S H R I H G N R W A V I A R H F P G R T D N A V K N H W H V M M A R I R R E R S
gm010780_Glyma0    L D P R I N R R P F T E E E E E R L L A A H R I H G N K W A L I A R L F P G R T D N A V K N H W H V I M A R K Q R E Q S
 
AT1G73410.1     K - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - P R L L P S T T S S S S L M A S E Q I M M S S G G Y N
gm045477_Glyma1    K I - - - - - - - - - - - - - - - - - - - - - - - - - - - - - N N P K L Q P - - - - - - - L F A P N L - - - - - - - - -
gm010780_Glyma0    K L Y M L F S T T R F G L E N G R F F D F R S L D N N K D D D N N Y R I V S D T T S S T S L A S W N F A S V P T T T S T
 
AT1G73410.1     H N Y S S D D R K K I F P A D F I N F P Y K F S H - - - - I N H L H F L - - - - - - K E F F - - - - - - T G K I A L N H
gm045477_Glyma1    - - - - K D D L E A I - P S F V E K Y Y E K Y S H P C V T L T H S S F Q F - - - P G K K F Y F Q D P S S A G S T V P P G
gm010780_Glyma0    T T K G A R D Y F N T S R S S S V Y L S E I Y P N P A F S L P N Y K R V V P T S P F R T F L G S S D H H D G W I I - - -
 
AT1G73410.1     K A N Q S K K P M E F Y N F L Q V N T D S N K S E I I D Q D S G Q S K R S - - D S D T K H E S - - - - - - - - H V P F F
gm045477_Glyma1    K S - - - - Q S V E F Y D F L Q V N T D S N E S E V T D - - - - N A R R D - - D E E V S Q D A V G Q K N K D N G V P F I
gm010780_Glyma0    - - - - K R D L M S F C D - - - - N N N N N S S S T F S K L K A S T E K D H Q Q Q Q T N E D A T N V E P K - - E V P F I
 
AT1G73410.1     D F L S V G N S A S
gm045477_Glyma1    D F L S T G G C - -
gm010780_Glyma0    D F L G V G V S S S
 
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