fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G73830.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm017947 not found in 165aa AT1G73830.1 not_1st 0.420253164 II
Gm020184 not found in 175aa AT1G73830.1 not_1st 0.405063291 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT1G73830.1     MANLSSDFQTFTMDDPIRQLAELSNTLHHFQTFPPPFSSSLDSLFFHNQFPDHFPGKS-L
gm020184_Glyma0 ------------ME---------------IQNFMMPFS-----------FPVLVPIGS-V
gm017947_Glyma0 ------------MD---------------LPETSSANS-----------TPAVSESGSKI
                            *:               :     . *            *      * :

AT1G73830.1     ENNFHQGIFFPSNIQNNEESSSQFDTKKRKSLMEAVSTSENSVSDQTLSTSSAQVSINGN
gm020184_Glyma0 KNEIHEVL-------------------------------------------QIQLLLFLR
gm017947_Glyma0 KHS---------------------------------------------------------
                ::.                                                         

AT1G73830.1     ISTKNNSSRRGKRSKNR--EEEKEREVVHVRARRGQATDSHSIAERVRRGKINERLKCLQ
gm020184_Glyma0 VEARQKISGRGKRVKRNSIEDKKPNEVVHVRAKRGQATDSHSLAERVRRGKINEKLRCLQ
gm017947_Glyma0 -------SGRGKRVKSNVTEEEKAKEVVHVRARRGQATDSHSLAERVRRGKINEKLRCLQ
                       * **** * .  *::* .*******:*********:***********:*:***

AT1G73830.1     DIVPGCYKTMGMATMLDEIINYVQSLQNQVEFLSMKLTAASSYYDFNSETDAVESMQKAK
gm020184_Glyma0 NIVPGCYKTMGMAIMLDEIINYVQSLQHQVEFLSMKLTAASTYYDLNSESDALETMQRAR
gm017947_Glyma0 NIVPGCYKTMGMAVMLDEIINYVQSLQHQVEFLSLKLTAASTFYDFNSETDALETMQRAR
                :************ *************:******:******::**:***:**:*:**:*:

AT1G73830.1     AREAVEMGQGRD----GSSVFHSSSWTL
gm020184_Glyma0 ASEVKELGKCDQ------FVFTP-----
gm017947_Glyma0 ASEAKELGKYKKEGYGGVSFFQPA-WPL
                * *. *:*:  .       .* .
BoxShade v3.31 C (beta, 970507) Output
AT1G73830.1     M A N L S S D F Q T F T M D D P I R Q L A E L S N T L H H F Q T F P P P F S S S L D S L F F H N Q F P D H F P G K S - L
gm020184_Glyma0    - - - - - - - - - - - - M E - - - - - - - - - - - - - - - I Q N F M M P F S - - - - - - - - - - - F P V L V P I G S - V
gm017947_Glyma0    - - - - - - - - - - - - M D - - - - - - - - - - - - - - - L P E T S S A N S - - - - - - - - - - - T P A V S E S G S K I
 
AT1G73830.1     E N N F H Q G I F F P S N I Q N N E E S S S Q F D T K K R K S L M E A V S T S E N S V S D Q T L S T S S A Q V S I N G N
gm020184_Glyma0    K N E I H E V L - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Q I Q L L L F L R
gm017947_Glyma0    K H S - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
 
AT1G73830.1     I S T K N N S S R R G K R S K N R - - E E E K E R E V V H V R A R R G Q A T D S H S I A E R V R R G K I N E R L K C L Q
gm020184_Glyma0    V E A R Q K I S G R G K R V K R N S I E D K K P N E V V H V R A K R G Q A T D S H S L A E R V R R G K I N E K L R C L Q
gm017947_Glyma0    - - - - - - - S G R G K R V K S N V T E E E K A K E V V H V R A R R G Q A T D S H S L A E R V R R G K I N E K L R C L Q
 
AT1G73830.1     D I V P G C Y K T M G M A T M L D E I I N Y V Q S L Q N Q V E F L S M K L T A A S S Y Y D F N S E T D A V E S M Q K A K
gm020184_Glyma0    N I V P G C Y K T M G M A I M L D E I I N Y V Q S L Q H Q V E F L S M K L T A A S T Y Y D L N S E S D A L E T M Q R A R
gm017947_Glyma0    N I V P G C Y K T M G M A V M L D E I I N Y V Q S L Q H Q V E F L S L K L T A A S T F Y D F N S E T D A L E T M Q R A R
 
AT1G73830.1     A R E A V E M G Q G R D - - - - G S S V F H S S S W T L
gm020184_Glyma0    A S E V K E L G K C D Q - - - - - - F V F T P - - - - -
gm017947_Glyma0    A S E A K E L G K Y K K E G Y G G V S F F Q P A - W P L
 
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