fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G73830.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm025252 not found in 301aa AT1G73830.1 1st_1st 0.420253164 Ia
Pt024172 not found in 273aa AT1G73830.1 1st_1st 0.448101265 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT1G73830.1     MANLSSDFQ-----------TFTMDDP----IRQLAELS---------NTLHHFQTFPPP
gm025252_Glyma0 MAEFTENMQLQSNIIRPSQFPFLEIDPSMELLNQFIGMNQHVLEN---------------
pt024172_POPTR_ MADFTADLQ----SFRPP-FPFLDIDPSMVALSQFTEVSQAILDNPSVNNIHSFM----P
                **::: ::*           .*   **    : *:  :.                     

AT1G73830.1     FSSSLDSLFFHNQFPDHFPGKSLENNFHQGIFFPSNIQNNEE--------------SSSQ
gm025252_Glyma0 ----------SNLKPE-FPGNLEEN-------FPALVNHN---ALPVSLPIFQA--ENEI
pt024172_POPTR_ FTS--DN-FFSHQAPE-FPGNLAEG-------FAGIFHQNDQTVMPVSQPFTTPGNESEF
                           :  *: ***:  *.       *.. .::*                ... 

AT1G73830.1     FDTKKRKSLMEAVSTSENSVSDQTLSTSSAQVSINGNISTKNN-----------------
gm025252_Glyma0 HEGKKRKSVDLPETSSAN---------STPAVSESGSKIKHVNFFYYFSLFFSTHHVLCW
pt024172_POPTR_ QESKKRKAMDVSESSSMN---------SSPQVSESGSKRRNVN-----------------
                 : ****::  . ::* *         *:. ** .*.   : *                 

AT1G73830.1     ---------------------------SSRRGKRSKNR--EEEKEREVVHVRARRGQATD
gm025252_Glyma0 IYIFMFKVVLCKSKTEFGLLFFCEYFQSSGRGKRVKSNVTEEEKAKEVVHVRARRGQATD
pt024172_POPTR_ ---------------------------SSRRGKGVKSN--EDGKPKDVVHVRARRGQATD
                                           ** ***  *..  *: * ::*************

AT1G73830.1     SHSIAERVRRGKINERLKCLQDIVPGCYKTMGMATMLDEIINYVQSLQNQVEFLSMKLTA
gm025252_Glyma0 SHSLAERVRRGKINEKLRCLQNIVPGCYKTMGMAVMLDEIINYVQSLQHQVEFLSLKLTA
pt024172_POPTR_ SHSLAERVRRGKINERLRCLQDIVPGCYKTMGMAVMLDEIINYVQSLQNQVEFLSMKLTA
                ***:***********:*:***:************.*************:******:****

AT1G73830.1     ASSYYDFNSETDAVESMQKAKAREAVEMG----QGRDGSSVFHSSSWTL
gm025252_Glyma0 ASTFYDFNSETDALETMQRARASEAKELGKYKKEGYGGVSFFQ-PAWPL
pt024172_POPTR_ ASTFYDFNAETDAIETMQRAKAQEAKELQRAMREGSGGFAHIH-STWSL
                **::****:****:*:**:*:* ** *:     :* .* : :: .:*.*
BoxShade v3.31 C (beta, 970507) Output
AT1G73830.1     M A N L S S D F Q - - - - - - - - - - - T F T M D D P - - - - I R Q L A E L S - - - - - - - - - N T L H H F Q T F P P P
gm025252_Glyma0    M A E F T E N M Q L Q S N I I R P S Q F P F L E I D P S M E L L N Q F I G M N Q H V L E N - - - - - - - - - - - - - - -
pt024172_POPTR_    M A D F T A D L Q - - - - S F R P P - F P F L D I D P S M V A L S Q F T E V S Q A I L D N P S V N N I H S F M - - - - P
 
AT1G73830.1     F S S S L D S L F F H N Q F P D H F P G K S L E N N F H Q G I F F P S N I Q N N E E - - - - - - - - - - - - - - S S S Q
gm025252_Glyma0    - - - - - - - - - - S N L K P E - F P G N L E E N - - - - - - - F P A L V N H N - - - A L P V S L P I F Q A - - E N E I
pt024172_POPTR_    F T S - - D N - F F S H Q A P E - F P G N L A E G - - - - - - - F A G I F H Q N D Q T V M P V S Q P F T T P G N E S E F
 
AT1G73830.1     F D T K K R K S L M E A V S T S E N S V S D Q T L S T S S A Q V S I N G N I S T K N N - - - - - - - - - - - - - - - - -
gm025252_Glyma0    H E G K K R K S V D L P E T S S A N - - - - - - - - - S T P A V S E S G S K I K H V N F F Y Y F S L F F S T H H V L C W
pt024172_POPTR_    Q E S K K R K A M D V S E S S S M N - - - - - - - - - S S P Q V S E S G S K R R N V N - - - - - - - - - - - - - - - - -
 
AT1G73830.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - S S R R G K R S K N R - - E E E K E R E V V H V R A R R G Q A T D
gm025252_Glyma0    I Y I F M F K V V L C K S K T E F G L L F F C E Y F Q S S G R G K R V K S N V T E E E K A K E V V H V R A R R G Q A T D
pt024172_POPTR_    - - - - - - - - - - - - - - - - - - - - - - - - - - - S S R R G K G V K S N - - E D G K P K D V V H V R A R R G Q A T D
 
AT1G73830.1     S H S I A E R V R R G K I N E R L K C L Q D I V P G C Y K T M G M A T M L D E I I N Y V Q S L Q N Q V E F L S M K L T A
gm025252_Glyma0    S H S L A E R V R R G K I N E K L R C L Q N I V P G C Y K T M G M A V M L D E I I N Y V Q S L Q H Q V E F L S L K L T A
pt024172_POPTR_    S H S L A E R V R R G K I N E R L R C L Q D I V P G C Y K T M G M A V M L D E I I N Y V Q S L Q N Q V E F L S M K L T A
 
AT1G73830.1     A S S Y Y D F N S E T D A V E S M Q K A K A R E A V E M G - - - - Q G R D G S S V F H S S S W T L
gm025252_Glyma0    A S T F Y D F N S E T D A L E T M Q R A R A S E A K E L G K Y K K E G Y G G V S F F Q - P A W P L
pt024172_POPTR_    A S T F Y D F N A E T D A I E T M Q R A K A Q E A K E L Q R A M R E G S G G F A H I H - S T W S L
 
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