fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G73830.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt024172 not found in 273aa AT1G73830.1 1st_1st 0.448101265 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G73830.1     MANLSSDFQTFT-----MD-DP----IRQLAELS---------NTLHHFQTFPPPFSSSL
pt024172_POPTR_ MADFTADLQSFRPPFPFLDIDPSMVALSQFTEVSQAILDNPSVNNIHSFM----PFTS--
                **::::*:*:*      :* **    : *::*:*         *.:* *     **:*  

AT1G73830.1     DSLFFHNQFPDHFPGKSLENN---FHQG------IFFPSNIQNNEESSSQF-DTKKRKSL
pt024172_POPTR_ DN-FFSHQAPE-FPGNLAEGFAGIFHQNDQTVMPVSQPFTTPGNE---SEFQESKKRKAM
                *. ** :* *: ***:  *.    ***.      :  * .  .**   *:* ::****::

AT1G73830.1     MEAVSTSENSVSDQTLSTSSAQVSINGNISTKNNSSRRGKRSKNREEEKEREVVHVRARR
pt024172_POPTR_ ---------DVSESSSMNSSPQVSESGSKRRNVNSSRRGKGVKSNEDGKPKDVVHVRARR
                         .**:.:  .**.*** .*.   : *******  *..*: * ::********

AT1G73830.1     GQATDSHSIAERVRRGKINERLKCLQDIVPGCYKTMGMATMLDEIINYVQSLQNQVEFLS
pt024172_POPTR_ GQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMAVMLDEIINYVQSLQNQVEFLS
                ********:*************:****************.********************

AT1G73830.1     MKLTAASSYYDFNSETDAVESMQKAKAREAVEMGQG-RDGSSVFH--SSSWTL
pt024172_POPTR_ MKLTAASTFYDFNAETDAIETMQRAKAQEAKELQRAMREGSGGFAHIHSTWSL
                *******::****:****:*:**:***:** *: :. *:**. *    *:*:*
BoxShade v3.31 C (beta, 970507) Output
AT1G73830.1     M A N L S S D F Q T F T - - - - - M D - D P - - - - I R Q L A E L S - - - - - - - - - N T L H H F Q T F P P P F S S S L
pt024172_POPTR_    M A D F T A D L Q S F R P P F P F L D I D P S M V A L S Q F T E V S Q A I L D N P S V N N I H S F M - - - - P F T S - -
 
AT1G73830.1     D S L F F H N Q F P D H F P G K S L E N N - - - F H Q G - - - - - - I F F P S N I Q N N E E S S S Q F - D T K K R K S L
pt024172_POPTR_    D N - F F S H Q A P E - F P G N L A E G F A G I F H Q N D Q T V M P V S Q P F T T P G N E - - - S E F Q E S K K R K A M
 
AT1G73830.1     M E A V S T S E N S V S D Q T L S T S S A Q V S I N G N I S T K N N S S R R G K R S K N R E E E K E R E V V H V R A R R
pt024172_POPTR_    - - - - - - - - - D V S E S S S M N S S P Q V S E S G S K R R N V N S S R R G K G V K S N E D G K P K D V V H V R A R R
 
AT1G73830.1     G Q A T D S H S I A E R V R R G K I N E R L K C L Q D I V P G C Y K T M G M A T M L D E I I N Y V Q S L Q N Q V E F L S
pt024172_POPTR_    G Q A T D S H S L A E R V R R G K I N E R L R C L Q D I V P G C Y K T M G M A V M L D E I I N Y V Q S L Q N Q V E F L S
 
AT1G73830.1     M K L T A A S S Y Y D F N S E T D A V E S M Q K A K A R E A V E M G Q G - R D G S S V F H - - S S S W T L
pt024172_POPTR_    M K L T A A S T F Y D F N A E T D A I E T M Q R A K A Q E A K E L Q R A M R E G S G G F A H I H S T W S L
 
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