fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G74500.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os011454 not found in 92aa AT1G26945.1 1st_not 0.673611111 II
Sb022206 not found in 213aa AT1G26945.1 1st_not 0.652777777 II
Gm015729 not found in 92aa AT1G74500.1 not_1st 0.798611111 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT1G74500.1     ----------------------------------------MSGRRSRSRQSSGTSRISED
Os011454_Os03t0 ----------------------------------------MSSRRSRSRQ-SGSSRITDE
gm015729_Glyma0 ----------------------------------------MSSRRSRSRQTSSSRNITDD
Sb022206_Sorbi1 LPFHHLCISNLLASLLTSQFVSRSLAKLLSPISQTTTSTKMSSRRSRSRQ-SGSSRITEE
                                                        **.******* *.: .*:::

AT1G74500.1     QINDLIIKLQQLLPELRDSRRSDKVSAARVLQDTCNYIRNLHREVDDLSERLSELLANSD
Os011454_Os03t0 QISDLVSKLQDLLPEARL-RSNDRVPSSRVLQETCNYIRSLHQEVDDLSERLSELLATSD
gm015729_Glyma0 QINDLVSKLQQLLPEIRD-RRSDKVSASKVLQETCNYIRSLHREVGDLSERLSELLDTTD
Sb022206_Sorbi1 QISDLVSKLQDLLPEARL-QSNARVPSARVLQETCNYIRSLHQEVDDLSERLSELLATSD
                **.**: ***:**** *  : . :*.:::***:******.**:**.********** .:*

AT1G74500.1     --TAQAALIRSLLTQ
Os011454_Os03t0 MSSAQAAIIRSLLM-
gm015729_Glyma0 --TAQAAIIRNLLMQ
Sb022206_Sorbi1 MSSAQAAVIRSLLM-
                  :****:**.**
BoxShade v3.31 C (beta, 970507) Output
AT1G74500.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M S G R R S R S R Q S S G T S R I S E D
Os011454_Os03t0    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M S S R R S R S R Q - S G S S R I T D E
gm015729_Glyma0    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M S S R R S R S R Q T S S S R N I T D D
Sb022206_Sorbi1    L P F H H L C I S N L L A S L L T S Q F V S R S L A K L L S P I S Q T T T S T K M S S R R S R S R Q - S G S S R I T E E
 
AT1G74500.1     Q I N D L I I K L Q Q L L P E L R D S R R S D K V S A A R V L Q D T C N Y I R N L H R E V D D L S E R L S E L L A N S D
Os011454_Os03t0    Q I S D L V S K L Q D L L P E A R L - R S N D R V P S S R V L Q E T C N Y I R S L H Q E V D D L S E R L S E L L A T S D
gm015729_Glyma0    Q I N D L V S K L Q Q L L P E I R D - R R S D K V S A S K V L Q E T C N Y I R S L H R E V G D L S E R L S E L L D T T D
Sb022206_Sorbi1    Q I S D L V S K L Q D L L P E A R L - Q S N A R V P S A R V L Q E T C N Y I R S L H Q E V D D L S E R L S E L L A T S D
 
AT1G74500.1     - - T A Q A A L I R S L L T Q
Os011454_Os03t0    M S S A Q A A I I R S L L M -
gm015729_Glyma0    - - T A Q A A I I R N L L M Q
Sb022206_Sorbi1    M S S A Q A A V I R S L L M -
 
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