Input
| Putative repression domain
|
|
AT1G74500.1 |
not found |
|
Ortholog
| Putative repression domain
| Reverse top hit
| Relation
| Blast score ratio
| Type
|
Gm010049 |
not found in 92aa |
AT1G74500.1 |
1st_1st |
0.833333333 |
Ia |
Pt023817 |
not found in 91aa |
AT1G74500.1 |
1st_1st |
0.763888888 |
Ia |
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.
CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)
AT1G74500.1 MSGRRSRSRQSSGTSRISEDQINDLIIKLQQLLPELRDSRRSDKVSAARVLQDTCNYIRN
gm010049_Glyma0 MSSRRSRSRQTSSSRNITDDQINDLVSKLQQLLPEIRD-RRSDKVSASKVLQETCNYIRS
pt023817_POPTR_ MSSRRSRSRQSSSSR-ISDDQILDLVTKLQQLLPEIRN-RRSDKVSAAKILQETCNYIKS
**.*******:*.: *::*** **: ********:*: ********:::**:*****:.
AT1G74500.1 LHREVDDLSERLSELLANSDTAQAALIRSLLTQ
gm010049_Glyma0 LHREVDDLSERLSELLATTDTAQAAIIRNLLMQ
pt023817_POPTR_ LHREVGDLSERLSELLETTDTAQAAIIRNLLMQ
*****.********** .:******:**.** *
BoxShade v3.31 C (beta, 970507) Output
AT1G74500.1 |
M |
S |
G |
R |
R |
S |
R |
S |
R |
Q |
S |
S |
G |
T |
S |
R |
I |
S |
E |
D |
Q |
I |
N |
D |
L |
I |
I |
K |
L |
Q |
Q |
L |
L |
P |
E |
L |
R |
D |
S |
R |
R |
S |
D |
K |
V |
S |
A |
A |
R |
V |
L |
Q |
D |
T |
C |
N |
Y |
I |
R |
N |
gm010049_Glyma0 |
M |
S |
S |
R |
R |
S |
R |
S |
R |
Q |
T |
S |
S |
S |
R |
N |
I |
T |
D |
D |
Q |
I |
N |
D |
L |
V |
S |
K |
L |
Q |
Q |
L |
L |
P |
E |
I |
R |
D |
- |
R |
R |
S |
D |
K |
V |
S |
A |
S |
K |
V |
L |
Q |
E |
T |
C |
N |
Y |
I |
R |
S |
pt023817_POPTR_ |
M |
S |
S |
R |
R |
S |
R |
S |
R |
Q |
S |
S |
S |
S |
R |
- |
I |
S |
D |
D |
Q |
I |
L |
D |
L |
V |
T |
K |
L |
Q |
Q |
L |
L |
P |
E |
I |
R |
N |
- |
R |
R |
S |
D |
K |
V |
S |
A |
A |
K |
I |
L |
Q |
E |
T |
C |
N |
Y |
I |
K |
S |
|
AT1G74500.1 |
L |
H |
R |
E |
V |
D |
D |
L |
S |
E |
R |
L |
S |
E |
L |
L |
A |
N |
S |
D |
T |
A |
Q |
A |
A |
L |
I |
R |
S |
L |
L |
T |
Q |
gm010049_Glyma0 |
L |
H |
R |
E |
V |
D |
D |
L |
S |
E |
R |
L |
S |
E |
L |
L |
A |
T |
T |
D |
T |
A |
Q |
A |
A |
I |
I |
R |
N |
L |
L |
M |
Q |
pt023817_POPTR_ |
L |
H |
R |
E |
V |
G |
D |
L |
S |
E |
R |
L |
S |
E |
L |
L |
E |
T |
T |
D |
T |
A |
Q |
A |
A |
I |
I |
R |
N |
L |
L |
M |
Q |
|
|