|
|
|
|
|
|
|
|
| Input | Putative repression domain | ||||
|---|---|---|---|---|---|
| AT1G74500.1 | not found | ||||
| Ortholog | Putative repression domain | Reverse top hit | Relation | Blast score ratio | Type |
| Sb002496 | not found in 86aa | AT3G28857.1 | not_not | 0.569444444 | III |
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.
CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)
AT1G74500.1 -MSGRRSRSRQSSGTSRISEDQINDLIIKLQQLLPELRDSRRSDKVSAARVLQDTCNYIR
Sb002496_Sorbi1 MSSGRR---------GRISDDEINELISKLQALLPESSRRRNASRSSASKLLKETCAYIK
**** .***:*:**:** *** **** *.:.: **:::*::** **:
AT1G74500.1 NLHREVDDLSERLSELLA--NSDTAQAALIRSLLTQ
Sb002496_Sorbi1 SLHREVDDLSERLSGLMSTMDNDSPQAEIIRSLLR-
.************* *:: :.*:.** :*****
| AT1G74500.1 | - | M | S | G | R | R | S | R | S | R | Q | S | S | G | T | S | R | I | S | E | D | Q | I | N | D | L | I | I | K | L | Q | Q | L | L | P | E | L | R | D | S | R | R | S | D | K | V | S | A | A | R | V | L | Q | D | T | C | N | Y | I | R |
| Sb002496_Sorbi1 | M | S | S | G | R | R | - | - | - | - | - | - | - | - | - | G | R | I | S | D | D | E | I | N | E | L | I | S | K | L | Q | A | L | L | P | E | S | S | R | R | R | N | A | S | R | S | S | A | S | K | L | L | K | E | T | C | A | Y | I | K |
| AT1G74500.1 | N | L | H | R | E | V | D | D | L | S | E | R | L | S | E | L | L | A | - | - | N | S | D | T | A | Q | A | A | L | I | R | S | L | L | T | Q | ||||||||||||||||||||||||
| Sb002496_Sorbi1 | S | L | H | R | E | V | D | D | L | S | E | R | L | S | G | L | M | S | T | M | D | N | D | S | P | Q | A | E | I | I | R | S | L | L | R | - | ||||||||||||||||||||||||