fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G74500.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb022206 not found in 213aa AT1G26945.1 1st_not 0.652777777 II
Sb002496 not found in 86aa AT3G28857.1 not_not 0.569444444 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT1G74500.1     ----------------------------------------MSGRRSRSRQSSGTSRISED
Sb002496_Sorbi1 ---------------------------------------MSSGRR---------GRISDD
Sb022206_Sorbi1 LPFHHLCISNLLASLLTSQFVSRSLAKLLSPISQTTTSTKMSSRRSRSRQ-SGSSRITEE
                                                         *.**         .**:::

AT1G74500.1     QINDLIIKLQQLLPELRDSRRSDKVSAARVLQDTCNYIRNLHREVDDLSERLSELLANSD
Sb002496_Sorbi1 EINELISKLQALLPESSRRRNASRSSASKLLKETCAYIKSLHREVDDLSERLSGLMSTMD
Sb022206_Sorbi1 QISDLVSKLQDLLPEAR-LQSNARVPSARVLQETCNYIRSLHQEVDDLSERLSELLATSD
                :*.:*: *** ****    :   : .::::*::** **:.**:********** *::. *

AT1G74500.1     --TAQAALIRSLLTQ
Sb002496_Sorbi1 NDSPQAEIIRSLLR-
Sb022206_Sorbi1 MSSAQAAVIRSLLM-
                  :.** :*****
BoxShade v3.31 C (beta, 970507) Output
AT1G74500.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M S G R R S R S R Q S S G T S R I S E D
Sb002496_Sorbi1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M S S G R R - - - - - - - - - G R I S D D
Sb022206_Sorbi1    L P F H H L C I S N L L A S L L T S Q F V S R S L A K L L S P I S Q T T T S T K M S S R R S R S R Q - S G S S R I T E E
 
AT1G74500.1     Q I N D L I I K L Q Q L L P E L R D S R R S D K V S A A R V L Q D T C N Y I R N L H R E V D D L S E R L S E L L A N S D
Sb002496_Sorbi1    E I N E L I S K L Q A L L P E S S R R R N A S R S S A S K L L K E T C A Y I K S L H R E V D D L S E R L S G L M S T M D
Sb022206_Sorbi1    Q I S D L V S K L Q D L L P E A R - L Q S N A R V P S A R V L Q E T C N Y I R S L H Q E V D D L S E R L S E L L A T S D
 
AT1G74500.1     - - T A Q A A L I R S L L T Q
Sb002496_Sorbi1    N D S P Q A E I I R S L L R -
Sb022206_Sorbi1    M S S A Q A A V I R S L L M -
 
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