fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G74500.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm015729 not found in 92aa AT1G74500.1 not_1st 0.798611111 II

Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G74500.1     MSGRRSRSRQSSGTSRISEDQINDLIIKLQQLLPELRDSRRSDKVSAARVLQDTCNYIRN
gm015729_Glyma0 MSSRRSRSRQTSSSRNITDDQINDLVSKLQQLLPEIRD-RRSDKVSASKVLQETCNYIRS
                **.*******:*.: .*::******: ********:** ********::***:******.

AT1G74500.1     LHREVDDLSERLSELLANSDTAQAALIRSLLTQ
gm015729_Glyma0 LHREVGDLSERLSELLDTTDTAQAAIIRNLLMQ
                *****.********** .:******:**.** *


BoxShade v3.31 C (beta, 970507) Output
AT1G74500.1     M S G R R S R S R Q S S G T S R I S E D Q I N D L I I K L Q Q L L P E L R D S R R S D K V S A A R V L Q D T C N Y I R N
gm015729_Glyma0    M S S R R S R S R Q T S S S R N I T D D Q I N D L V S K L Q Q L L P E I R D - R R S D K V S A S K V L Q E T C N Y I R S
 
AT1G74500.1     L H R E V D D L S E R L S E L L A N S D T A Q A A L I R S L L T Q
gm015729_Glyma0    L H R E V G D L S E R L S E L L D T T D T A Q A A I I R N L L M Q
 
0