fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G74500.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm002763 not found in 93aa AT1G26945.1 not_not 0.75 III
Gm000625 not found in 93aa AT1G26945.1 not_not 0.743055555 III
Gm022905 not found in 93aa AT1G26945.1 not_not 0.708333333 III
Gm049258 not found in 93aa AT1G26945.1 not_not 0.708333333 III
Gm051002 not found in 91aa AT1G26945.1 not_not 0.708333333 III
Gm035037 not found in 91aa AT1G26945.1 not_not 0.708333333 III
Gm050375 not found in 92aa AT1G26945.1 not_not 0.680555555 III
Gm025833 not found in 91aa AT1G26945.1 not_not 0.666666666 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT1G74500.1     MSGRRSRSRQSSGTSRISEDQINDLIIKLQQLLPELRDSRRSDKVSAARVLQDTCNYIRN
gm022905_Glyma0 MSSRRSRSRQSGVSTEITDAQITDLISKLQQLIPELRA-RRSDKVSASKVLQETCNYIKS
gm035037_Glyma1 MSSRRSR--QQSASTRISDDQIIDLVSKLRQLVPEIRD-RRSDKVSASKVLQETCNYIRS
gm049258_Glyma1 MSSRRSRSSQSDVSTEITDAQITDIISKLQQLIPELDA-RRSDKVSASKVLQETCNYIKS
gm025833_Glyma0 MSSRRSR--QHSGSTRISDDQIIELVSKLRQLVPEIRN-RRSDKVSASKVLQETCNYIRS
gm050375_Glyma1 MSSRRSR--QHSGSTRISDDQIIELVSKLRQLVPEIRN-RRSDKVSASKVLQETCNYIRG
gm051002_Glyma1 MSSRRSR--QQSASTRISDDQIIDLVSKLRQLVPEIRD-RRSDKVSASKVLQETCNYIRS
gm002763_Glyma0 MSSRRSRSRQSGASAEITDAQITDLVSKLQQLIPELRA-RRSDKVSAAKVLQETCNYIKN
gm000625_Glyma0 MSSRRSRSRQSGASAEITDAQITDLVSKLQQLIPELRA-RRSDKVSSAKVLQETCNYIKN
                **.****  * . ::.*:: ** ::: **:**:**:   *******:::***:*****:.

AT1G74500.1     LHREVDDLSERLSELLA--NSDTAQAALIRSLLTQ
gm022905_Glyma0 LHREVDDLSDRLSQLLATTDSNSAQAAIIRSLLM-
gm035037_Glyma1 LHREVDDLSERLSQLLATIDADSPEAAIIRSLIN-
gm049258_Glyma1 LHREVDDLSDRLSQLLATTDSNSAQAAIIRSLLL-
gm025833_Glyma0 LHREVSDLSERLSQLLTTIDADSAEAGIIRSLLN-
gm050375_Glyma1 LHREVSDLSERLSQLLTTIDADSAEAGIIRSLLNQ
gm051002_Glyma1 LHREVDDLSERLSQLLATIDADSPEAAIIRSLIN-
gm002763_Glyma0 LHREVDDLSDRLSELLANTDSNSAQAAIIRSLLM-
gm000625_Glyma0 LHREVDDLSDRLSELLANTDSNSAQAAIIRSLLM-
                *****.***:***:**:  ::::.:*.:****:
BoxShade v3.31 C (beta, 970507) Output
AT1G74500.1     M S G R R S R S R Q S S G T S R I S E D Q I N D L I I K L Q Q L L P E L R D S R R S D K V S A A R V L Q D T C N Y I R N
gm022905_Glyma0    M S S R R S R S R Q S G V S T E I T D A Q I T D L I S K L Q Q L I P E L R A - R R S D K V S A S K V L Q E T C N Y I K S
gm035037_Glyma1    M S S R R S R - - Q Q S A S T R I S D D Q I I D L V S K L R Q L V P E I R D - R R S D K V S A S K V L Q E T C N Y I R S
gm049258_Glyma1    M S S R R S R S S Q S D V S T E I T D A Q I T D I I S K L Q Q L I P E L D A - R R S D K V S A S K V L Q E T C N Y I K S
gm025833_Glyma0    M S S R R S R - - Q H S G S T R I S D D Q I I E L V S K L R Q L V P E I R N - R R S D K V S A S K V L Q E T C N Y I R S
gm050375_Glyma1    M S S R R S R - - Q H S G S T R I S D D Q I I E L V S K L R Q L V P E I R N - R R S D K V S A S K V L Q E T C N Y I R G
gm051002_Glyma1    M S S R R S R - - Q Q S A S T R I S D D Q I I D L V S K L R Q L V P E I R D - R R S D K V S A S K V L Q E T C N Y I R S
gm002763_Glyma0    M S S R R S R S R Q S G A S A E I T D A Q I T D L V S K L Q Q L I P E L R A - R R S D K V S A A K V L Q E T C N Y I K N
gm000625_Glyma0    M S S R R S R S R Q S G A S A E I T D A Q I T D L V S K L Q Q L I P E L R A - R R S D K V S S A K V L Q E T C N Y I K N
 
AT1G74500.1     L H R E V D D L S E R L S E L L A - - N S D T A Q A A L I R S L L T Q
gm022905_Glyma0    L H R E V D D L S D R L S Q L L A T T D S N S A Q A A I I R S L L M -
gm035037_Glyma1    L H R E V D D L S E R L S Q L L A T I D A D S P E A A I I R S L I N -
gm049258_Glyma1    L H R E V D D L S D R L S Q L L A T T D S N S A Q A A I I R S L L L -
gm025833_Glyma0    L H R E V S D L S E R L S Q L L T T I D A D S A E A G I I R S L L N -
gm050375_Glyma1    L H R E V S D L S E R L S Q L L T T I D A D S A E A G I I R S L L N Q
gm051002_Glyma1    L H R E V D D L S E R L S Q L L A T I D A D S P E A A I I R S L I N -
gm002763_Glyma0    L H R E V D D L S D R L S E L L A N T D S N S A Q A A I I R S L L M -
gm000625_Glyma0    L H R E V D D L S D R L S E L L A N T D S N S A Q A A I I R S L L M -
 
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