fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G74660.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt019485 not found in 130aa AT3G28917.1 1st_not 0.701754385 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G74660.1     ----------------------------------MMKKRQMVIKQRSRNSNTSSSWTTTS
pt019485_POPTR_ MPASNYRSVFQLESSSLVYQGFERGEGSVELGTSKMRKRQVAVRRTEEPSR---------
                                                   *:***:.::: .. *.         

AT1G74660.1     SSSSSSEISNVRYVECQKNHAANIGGYAVDGCREFMAAGVEGTVDALRCAACGCHRNFHR
pt019485_POPTR_ SSTTSFTIRNVKYGECLKNHAASVGGYAVDGCREFMASGEEGTADALTCAACGCHRNFHR
                **::*  * **:* ** *****.:*************:* ***.*** ************

AT1G74660.1     KEVDTEVVCEYSPPNA---
pt019485_POPTR_ REVETEVICDCSSPSSNGN
                :**:***:*: *.*.:
BoxShade v3.31 C (beta, 970507) Output
AT1G74660.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M M K K R Q M V I K Q R S R N S N T S S S W T T T S
pt019485_POPTR_    M P A S N Y R S V F Q L E S S S L V Y Q G F E R G E G S V E L G T S K M R K R Q V A V R R T E E P S R - - - - - - - - -
 
AT1G74660.1     S S S S S S E I S N V R Y V E C Q K N H A A N I G G Y A V D G C R E F M A A G V E G T V D A L R C A A C G C H R N F H R
pt019485_POPTR_    S S T T S F T I R N V K Y G E C L K N H A A S V G G Y A V D G C R E F M A S G E E G T A D A L T C A A C G C H R N F H R
 
AT1G74660.1     K E V D T E V V C E Y S P P N A - - -
pt019485_POPTR_    R E V E T E V I C D C S S P S S N G N
 
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