fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G74660.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm015752 not found in 89aa AT1G18835.1 1st_not 0.748538011 II
Gm046617 not found in 79aa AT1G74660.1 not_1st 0.608187134 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT1G74660.1     MMKKRQMVIKQRSRNSNTSSSWTTTSSSSSSSEISNVRYVECQKNHAANIGGYAVDGCRE
gm015752_Glyma0 -MKKRQVVVK--------------SVANTSSSVMRNIRYGECQKNHAANIGGYAVDGCRE
gm046617_Glyma1 -MKKRQVVVK--------------RDYATSSPAVGNIRYGECQKNHAANTGGYAVDGCRE
                 *****:*:*                  :**. : *:** ********* **********

AT1G74660.1     FMAAGVEGTVDALRCAACGCHRNFHRKEVDTEVVCEYSPPNA--
gm015752_Glyma0 FMASTGEGAGGALTCAACGCHRNFHRREVNTEVVCEYSPPNSGR
gm046617_Glyma1 FMASACEGTNAALTCAACGCHRNFHKREVLHGVN----------
                ***:  **:  ** ***********::**   *
BoxShade v3.31 C (beta, 970507) Output
AT1G74660.1     M M K K R Q M V I K Q R S R N S N T S S S W T T T S S S S S S S E I S N V R Y V E C Q K N H A A N I G G Y A V D G C R E
gm015752_Glyma0    - M K K R Q V V V K - - - - - - - - - - - - - - S V A N T S S S V M R N I R Y G E C Q K N H A A N I G G Y A V D G C R E
gm046617_Glyma1    - M K K R Q V V V K - - - - - - - - - - - - - - R D Y A T S S P A V G N I R Y G E C Q K N H A A N T G G Y A V D G C R E
 
AT1G74660.1     F M A A G V E G T V D A L R C A A C G C H R N F H R K E V D T E V V C E Y S P P N A - -
gm015752_Glyma0    F M A S T G E G A G G A L T C A A C G C H R N F H R R E V N T E V V C E Y S P P N S G R
gm046617_Glyma1    F M A S A C E G T N A A L T C A A C G C H R N F H K R E V L H G V N - - - - - - - - - -
 
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