fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G74840.1 SPAPLSLNLSLASSNL at 237/265 in AT1G74840.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm015689 SIDPPTLSLGLSLSSS in 256/294 AT1G74840.1 1st_1st 0.435207823 Ia
Pt024192 TSVMPDLNLNLKPVAD in 263/313 AT1G74840.1 1st_1st 0.400977995 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT1G74840.1     -MADGSTSSSESTTACAGSGTRREIMLFGVRVVLDPMRKCVSLNNLSDYEQTAETPKIDG
pt024192_POPTR_ MMAGSSSTGSGVEGAAET--RPKEILLFGVRVVVDNMRKIVSLNNMNDYEHLNDNEE-DE
gm015689_Glyma0 -MPLSSSSSSAVDSAVSG-----EIMLFGVRVVVDSMRKSVSMNNLSQY----ELP----
                 *. .*::.*    *        **:*******:* *** **:**:.:*    :      

AT1G74840.1     EDRDEQDMNKTPAGYASADEALPMSSSNG--KIERKRGVPWTEEEHKLFLLGLQRVGKGD
pt024192_POPTR_ EAAAGASASAAVSGYMSADDTVQHSSSASERRSQRKRGLPWTEEEHKRFLVGLQKMGKGD
gm015689_Glyma0 --RDAANAKDDAAGYASADDAAPINSDKN--R-DRKRGIPWTEEEHKLFLVGLQKVGKGD
                      . .   :** ***::   .*. .  : :****:******** **:***::****

AT1G74840.1     WKGISRNFVKTRTSTQVASHAQKYFLRRSNLNRRRRRSSLFDMTTDTV--IPMEEDHQVL
pt024192_POPTR_ WRGISRNFVKTRTSTQVASHAQKHFLRNSNVNRRRRRSSLFDITTDMVTETPMEE-QQAL
gm015689_Glyma0 WRGISRNYVKTRTPTQVASHAQKYFLRRTNLNRRRRRSSLFDITTDSVSTTPMEEGVQIQ
                *:*****:*****.*********:***.:*:***********:*** *   ****  *  

AT1G74840.1     IQENTS--QSSSPV---P-EINNFSIHPVMQVFPE---------FPVPTGNQ-----SYG
pt024192_POPTR_ CQDSKS--NNQAPKSNPPLQANSTTSFPGVLPFPIRRRTVNPAVSPLQIESPIMENRSLG
gm015689_Glyma0 HQDNVSLFHPVYPVT--P-EGSNMNGFPKMSMYPKD---VGSGVMSVQAGNPM-ETLTLG
                 *:. *  :   *    * : .. . .* :  :*           .:   .      : *

AT1G74840.1     QLT------SSNLINLVPL--------------TFQS--SPAPLSLNLSLASSNLNEPSP
pt024192_POPTR_ QGNQSLNY-STNLVLTVPVVPAPCTSVMPDLNLNLKPVADSSPLSLDLS-SSSD-QRASS
gm015689_Glyma0 QGNVEQNGPSTKLVCTTPIVPDHRGSTVSDITASLSSI-DPPTLSLGLSLSSSP-RQTSS
                * .      *::*:  .*:              .:..  ....***.** :**  ...*.

AT1G74840.1     SMH------PAFNT----IGVA
pt024192_POPTR_ SRHSAFQTMSSLKNGDNIIVVA
gm015689_Glyma0 SIHAALHALPYFNNQDSIISAA
                * *      . ::.    * .*
BoxShade v3.31 C (beta, 970507) Output
AT1G74840.1     - M A D G S T S S S E S T T A C A G S G T R R E I M L F G V R V V L D P M R K C V S L N N L S D Y E Q T A E T P K I D G
pt024192_POPTR_    M M A G S S S T G S G V E G A A E T - - R P K E I L L F G V R V V V D N M R K I V S L N N M N D Y E H L N D N E E - D E
gm015689_Glyma0    - M P L S S S S S S A V D S A V S G - - - - - E I M L F G V R V V V D S M R K S V S M N N L S Q Y - - - - E L P - - - -
 
AT1G74840.1     E D R D E Q D M N K T P A G Y A S A D E A L P M S S S N G - - K I E R K R G V P W T E E E H K L F L L G L Q R V G K G D
pt024192_POPTR_    E A A A G A S A S A A V S G Y M S A D D T V Q H S S S A S E R R S Q R K R G L P W T E E E H K R F L V G L Q K M G K G D
gm015689_Glyma0    - - R D A A N A K D D A A G Y A S A D D A A P I N S D K N - - R - D R K R G I P W T E E E H K L F L V G L Q K V G K G D
 
AT1G74840.1     W K G I S R N F V K T R T S T Q V A S H A Q K Y F L R R S N L N R R R R R S S L F D M T T D T V - - I P M E E D H Q V L
pt024192_POPTR_    W R G I S R N F V K T R T S T Q V A S H A Q K H F L R N S N V N R R R R R S S L F D I T T D M V T E T P M E E - Q Q A L
gm015689_Glyma0    W R G I S R N Y V K T R T P T Q V A S H A Q K Y F L R R T N L N R R R R R S S L F D I T T D S V S T T P M E E G V Q I Q
 
AT1G74840.1     I Q E N T S - - Q S S S P V - - - P - E I N N F S I H P V M Q V F P E - - - - - - - - - F P V P T G N Q - - - - - S Y G
pt024192_POPTR_    C Q D S K S - - N N Q A P K S N P P L Q A N S T T S F P G V L P F P I R R R T V N P A V S P L Q I E S P I M E N R S L G
gm015689_Glyma0    H Q D N V S L F H P V Y P V T - - P - E G S N M N G F P K M S M Y P K D - - - V G S G V M S V Q A G N P M - E T L T L G
 
AT1G74840.1     Q L T - - - - - - S S N L I N L V P L - - - - - - - - - - - - - - T F Q S - - S P A P L S L N L S L A S S N L N E P S P
pt024192_POPTR_    Q G N Q S L N Y - S T N L V L T V P V V P A P C T S V M P D L N L N L K P V A D S S P L S L D L S - S S S D - Q R A S S
gm015689_Glyma0    Q G N V E Q N G P S T K L V C T T P I V P D H R G S T V S D I T A S L S S I - D P P T L S L G L S L S S S P - R Q T S S
 
AT1G74840.1     S M H - - - - - - P A F N T - - - - I G V A
pt024192_POPTR_    S R H S A F Q T M S S L K N G D N I I V V A
gm015689_Glyma0    S I H A A L H A L P Y F N N Q D S I I S A A
 
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