fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G74840.1 SPAPLSLNLSLASSNL at 237/265 in AT1G74840.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt024192 TSVMPDLNLNLKPVAD in 263/313 AT1G74840.1 1st_1st 0.400977995 Ia
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G74840.1     MADGSTSSSESTTACAGSGTR-REIMLFGVRVVLDPMRKCVSLNNLSDYEQTAETPKIDG
pt024192_POPTR_ MMAGSSSTGSGVEGAA--ETRPKEILLFGVRVVVDNMRKIVSLNNMNDYEH------LND
                *  **:*:.... ..*   ** :**:*******:* *** *****:.***:      ::.

AT1G74840.1     EDRDEQ-----DMNKTPAGYASADEALPMSSSNG--KIERKRGVPWTEEEHKLFLLGLQR
pt024192_POPTR_ NEEDEEAAAGASASAAVSGYMSADDTVQHSSSASERRSQRKRGLPWTEEEHKRFLVGLQK
                ::.**:     . . : :** ***:::  *** .  : :****:******** **:***:

AT1G74840.1     VGKGDWKGISRNFVKTRTSTQVASHAQKYFLRRSNLNRRRRRSSLFDMTTDTV--IPMEE
pt024192_POPTR_ MGKGDWRGISRNFVKTRTSTQVASHAQKHFLRNSNVNRRRRRSSLFDITTDMVTETPMEE
                :*****:*********************:***.**:***********:*** *   ****

AT1G74840.1     DHQVLIQE----NTSQSSSPVPEINNFSIHPVMQVFP---------------EFPVPTGN
pt024192_POPTR_ -QQALCQDSKSNNQAPKSNPPLQANSTTSFPGVLPFPIRRRTVNPAVSPLQIESPI-MEN
                 :*.* *:    * : .*.*  : *. : .* :  **               * *:   *

AT1G74840.1     QSYGQLT-----SSNLINLVPLTFQSSPAP-------LSLNLS-----------LASSNL
pt024192_POPTR_ RSLGQGNQSLNYSTNLVLTVPVV----PAPCTSVMPDLNLNLKPVADSSPLSLDLSSSSD
                :* ** .     *:**:  **:.    ***       *.***.           *:**. 

AT1G74840.1     NEPSPSMHPAF----------NTIGVA
pt024192_POPTR_ QRASSSRHSAFQTMSSLKNGDNIIVVA
                :..*.* *.**          * * **
BoxShade v3.31 C (beta, 970507) Output
AT1G74840.1     M A D G S T S S S E S T T A C A G S G T R - R E I M L F G V R V V L D P M R K C V S L N N L S D Y E Q T A E T P K I D G
pt024192_POPTR_    M M A G S S S T G S G V E G A A - - E T R P K E I L L F G V R V V V D N M R K I V S L N N M N D Y E H - - - - - - L N D
 
AT1G74840.1     E D R D E Q - - - - - D M N K T P A G Y A S A D E A L P M S S S N G - - K I E R K R G V P W T E E E H K L F L L G L Q R
pt024192_POPTR_    N E E D E E A A A G A S A S A A V S G Y M S A D D T V Q H S S S A S E R R S Q R K R G L P W T E E E H K R F L V G L Q K
 
AT1G74840.1     V G K G D W K G I S R N F V K T R T S T Q V A S H A Q K Y F L R R S N L N R R R R R S S L F D M T T D T V - - I P M E E
pt024192_POPTR_    M G K G D W R G I S R N F V K T R T S T Q V A S H A Q K H F L R N S N V N R R R R R S S L F D I T T D M V T E T P M E E
 
AT1G74840.1     D H Q V L I Q E - - - - N T S Q S S S P V P E I N N F S I H P V M Q V F P - - - - - - - - - - - - - - - E F P V P T G N
pt024192_POPTR_    - Q Q A L C Q D S K S N N Q A P K S N P P L Q A N S T T S F P G V L P F P I R R R T V N P A V S P L Q I E S P I - M E N
 
AT1G74840.1     Q S Y G Q L T - - - - - S S N L I N L V P L T F Q S S P A P - - - - - - - L S L N L S - - - - - - - - - - - L A S S N L
pt024192_POPTR_    R S L G Q G N Q S L N Y S T N L V L T V P V V - - - - P A P C T S V M P D L N L N L K P V A D S S P L S L D L S S S S D
 
AT1G74840.1     N E P S P S M H P A F - - - - - - - - - - N T I G V A
pt024192_POPTR_    Q R A S S S R H S A F Q T M S S L K N G D N I I V V A
 
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